Stem-loop gma-MIR160c

Accession

MI0017822

Description

Glycine max gma-MIR160c precursor miRNA

Literature search

20 open access papers mention gma-MIR160c
(59 sentences)

Sequence

UGCCUGGCUCCCUGUAUGCCauuugcagagcccaucaggacagugauggccuuaacgaauggcgugcgaggagccaugcauguugugcguu
(((.(((((((.(((((((((((((..(((.((((((......)))))).)))..))))))))))))).))))))).)))...........

Structure

-----------   C       C             ca   c      gg 
           UGC UGGCUCC UGUAUGCCauuug  gag ccauca  a
           ||| ||||||| |||||||||||||  ||| ||||||   
           acg accgagg gcgugcgguaagc  uuc gguagu  c
uugcguguugu   u       a             aa   c      ga 

Annotation confidence Not enough data

Genome context

chr19: 43999110-43999200 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from gma-MIR160c

Mature gma-miR160c

• Accession: MIMAT0020971
• Description: Glycine max gma-miR160c mature miRNA
• Sequence: 1 - UGCCUGGCUCCCUGUAUGCC - 20
• Evidence: experimental ; 454 [1], Illumina [2]

References

1. PubMed ID: 21504877
   MicroRNAs in the shoot apical meristem of soybean
   "Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL"
   "J Exp Bot (2011) 62:2495-2506


2. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153