Stem-loop gma-MIR167g

Accession

MI0016548

Description

Glycine max gma-MIR167g precursor miRNA

Literature search

27 open access papers mention gma-MIR167g
(186 sentences)

Sequence

13503422 reads, 26653.0 reads per million, 177 experiments

cagcaguUGAAGCUGCCAGCAUGAUCUGaguuuaccuucuauugguaagaacaGAUCAUGUGGCUGCUUCACCuguug
((((((.((((((.((((.(((((((((..((((((.......))))))..))))))))))))).)))))).))))))

Structure

      u      U    G         ag      uu 
cagcag UGAAGC GCCA CAUGAUCUG  uuuacc  c
|||||| |||||| |||| |||||||||  ||||||  u
guuguC ACUUCG CGGU GUACUAGac  gaaugg  a
      C      U    -         aa      uu 

Annotation confidence High

Genome context

chr10: 39602156-39602233 [+]

Mature gma-miR167g-5p

• Accession: MIMAT0018307
• Description: Glycine max gma-miR167g-5p mature miRNA
• Sequence: 8 - UGAAGCUGCCAGCAUGAUCUG - 28
• Evidence: experimental ; Illumina [1], 454 [2]

Mature gma-miR167g-3p

• Accession: MIMAT0054135
• Description: Glycine max gma-miR167g-3p mature miRNA
• Sequence: 54 - GAUCAUGUGGCUGCUUCACC - 73
• Evidence: experimental ; unknown

References

1. PubMed ID: 20122185
   Prediction of novel miRNAs and associated target genes in Glycine max
   Joshi T, Yan Z, Libault M, Jeong DH, Park S, Green PJ, Sherrier DJ, Farmer A, May G, Meyers BC, Xu D, Stacey G
   BMC Bioinformatics (2010) 11:S14


2. PubMed ID: 21504877
   MicroRNAs in the shoot apical meristem of soybean
   "Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL"
   "J Exp Bot (2011) 62:2495-2506