Stem-loop gma-MIR164c

Accession

MI0017827

Description

Glycine max gma-MIR164c precursor miRNA

Literature search

18 open access papers mention gma-MIR164c
(39 sentences)

Sequence

222054 reads, 991.0 reads per million, 178 experiments

cugagcaagaUGGAGAAGCAGGGCACGUGCAauucuaacucaugaaaccauagaaucauagaaaaucacuUGUUUUUUUCUUCUUCUUuu
......((((.(((((((.((((((.(((...(((((..(((((....))).))....)))))...))).))))))))))))).))))..

Structure

cugagc    U       C      C   CAa     --ac  -   a 
      aaga GGAGAAG AGGGCA GUG   uucua    uc aug a
      |||| ||||||| |||||| |||   |||||    || |||  
      UUCU CUUCUUU UUUUGU cac   aagau    ag uac a
----uu    U       -      u   uaa     acua  a   c 

Annotation confidence High

Genome context

chr3: 5194846-5194935 [-]

Mature gma-miR164c-5p

• Accession: MIMAT0020976
• Description: Glycine max gma-miR164c-5p mature miRNA
• Sequence: 11 - UGGAGAAGCAGGGCACGUGCA - 31
• Evidence: experimental ; 454 [1]

Mature gma-miR164c-3p

• Accession: MIMAT0054173
• Description: Glycine max gma-miR164c-3p mature miRNA
• Sequence: 71 - UGUUUUUUUCUUCUUCUU - 88
• Evidence: experimental ; unknown

References

1. PubMed ID: 21504877
   MicroRNAs in the shoot apical meristem of soybean
   "Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL"
   "J Exp Bot (2011) 62:2495-2506