Stem-loop gma-MIR1530

Accession

MI0007249

Description

Glycine max gma-MIR1530 precursor miRNA

Literature search

2 open access papers mention gma-MIR1530
(9 sentences)

Sequence

gcaaaauauaauauuaauauaaguuuuaugugaaaauaauuuaauuuuuuuuaauuuauuauauuuuuauaauuuuauauauuaucuuuuaaaauauaauauauaagauuaaauucuaUUUUCACAUAAAUUAAAAUAUguauguuuau
.........(((((..((((....((((((((((((((((((((((((.....((.(((((((((((.......................))))))))))).))))))))))))..)))))))))))))).....))))..)))))...

Structure

gcaaaauau     ua    -aagu              --          uuuua  u           uauaauuuua 
         aauau  auau     uuuaugugaaaaua  auuuaauuuu     au uauuauauuuu          u
         |||||  ||||     ||||||||||||||  ||||||||||     || |||||||||||          a
         uugua  UAUA     AAAUACACUUUUau  uaaauuagaa     ua auaauauaaaa          u
------uau     ug    AAAUU              cu          -----  u           uuuucuauua 

Annotation confidence Not enough data

Genome context

chr10: 41788173-41788321 [+]

Mature gma-miR1530

• Accession: MIMAT0007392
• Description: Glycine max gma-miR1530 mature miRNA
• Sequence: 119 - UUUUCACAUAAAUUAAAAUAU - 139
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 18402695
   Novel and nodulation-regulated microRNAs in soybean roots
   Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O
   BMC Genomics (2008) 9:160