miRBase entry: gma-MIR5675

Dead hairpin entry

Stem-loop gma-MIR5675


Accession
MI0019272
Description
Glycine max gma-MIR5675 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

4083 reads, 84.0 reads per million, 178 experiments
cgugauuuuugucUCCAUUGCUGUUGUCUCUAUCucaaauuucuuuuuuggugucugaguuaggguucuuaaaauuuuuauuugcauuauauuugcgucuuauaauaauugaauauaggaugaaucuuuguauagcaaauuacuauaagaagcggauuacuaucagaugcaaauaaaaaguucaggaaccuuaucucagacaccaaaaaucaaaucaagaUAGAGACGACAACAAUGGAAAcaaaaaucac
.(((((((((((.(((((((.((((((((((((((...((((..(((((((((((((((.((((((((((....((((((((((((((..((((((.(((((((.(((((...((((.((.......)).))))...))))).))))))).))))))........))))))))))))))....)))))))))).)))))))))))))))..))))..)))))))))))))).))))))).)))))))))))

Structure
c           c       C              caa    cu               u          aaaa              ------au      g       a     gaa    g  ug 
 gugauuuuugu UCCAUUG UGUUGUCUCUAUCu   auuu  uuuuuggugucugag uaggguucuu    uuuuuauuugcauu        auuugc ucuuaua uaauu   uaua ga  a
 ||||||||||| ||||||| ||||||||||||||   ||||  ||||||||||||||| ||||||||||    ||||||||||||||        |||||| ||||||| |||||   |||| ||  a
 cacuaaaaacA AGGUAAC ACAGCAGAGAUaga   uaaa  aaaaaccacagacuc auuccaagga    aaaaauaaacguag        uaggcg agaauau auuaa   auau uu  u
-           A       A              -ac    cu               u          cuug              acuaucau      a       c     acg    g  uc