miRBase entry: gma-MIR5676

Dead hairpin entry

Stem-loop gma-MIR5676


Accession
MI0019274
Description
Glycine max gma-MIR5676 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

2404 reads, 13.0 reads per million, 120 experiments
cugccccuccUCGACACCAUAUGUAGAGGCAGcggaggaaucauuggaaacaacuuuccaauccuucgaggugguaaguugugccucuguguaaacaaguCCAUUGCUACCUUGUUUCUuuaaugcgguccugaugguggcgcggg
((((.((.(((((..(((.(((..(((((((.(((((((....(((((((....))))))))))))))(((((((((..((.((...(((....))).)).))))))))))))))))))...))).)))..))).)).)).)))).

Structure
-    c  u  -   AC   A   -GU       Gcggaggaaucauuggaaacaacuuuccaauccuucg         gu  u  cuc   g 
 cugc cc cc UCG  ACC UAU   AGAGGCA                                     aggugguaa  ug gc   ugu u
 |||| || || |||  ||| |||   |||||||                                     |||||||||  || ||   |||  
 ggcg gg gg agu  ugg gua   UCUUUGU                                     UCCAUCGUU  AC ug   aca a
g    c  u  u   cc   c   auu       -------------------------------------         --  C  --a   a