Stem-loop gma-MIR167l

Accession

MI0033446

Description

Glycine max gma-MIR167l precursor miRNA

Literature search

27 open access papers mention gma-MIR167l
(180 sentences)

Sequence

6066753 reads, 13235.0 reads per million, 178 experiments

aaggaaaaagUGAAGCUGCCAGCAUGAUCUagcuuugguuagagagcugaagaagaguguuaaaugcuaacccuuacuaGGUCAUGCUGUAACAGCCUCACUCcuuccua
.(((((..(((((.((((.(((((((((((((....((((((..(((...........))).....))))))....)))))))))))))...)))).)))))..))))).

Structure

a     aa     A    --C             cuuu      ---ag   ugaa 
 aggaa  agUGA GCUG   CAGCAUGAUCUag    gguuag     agc    g
 |||||  ||||| ||||   |||||||||||||    ||||||     |||    a
 uccuu  UCACU CGAC   GUCGUACUGGauc    ccaauc     uug    a
a     cC     C    AAU             auuc      guaaa   ugag 

Annotation confidence High

Genome context

chr3: 37301792-37301901 [+]

Mature gma-miR167l-5p

• Accession: MIMAT0041654
• Description: Glycine max gma-miR167l-5p mature miRNA
• Sequence: 11 - UGAAGCUGCCAGCAUGAUCU - 30
• Evidence: experimental ; Illumina [1]

Mature gma-miR167l-3p

• Accession: MIMAT0054499
• Description: Glycine max gma-miR167l-3p mature miRNA
• Sequence: 80 - GGUCAUGCUGUAACAGCCUCACUC - 103
• Evidence: experimental ; unknown

References

1. PubMed ID: 25747880
   Evolutionary patterns and coevolutionary consequences of MIRNA genes and microRNA targets triggered by multiple mechanisms of genomic duplications in soybean
   "Zhao M, Meyers BC, Cai C, Xu W, Ma J"
   "Plant Cell (2015) 27:546-562