Stem-loop gma-MIR164j

Accession

MI0021688

Description

Glycine max gma-MIR164j precursor miRNA

Literature search

18 open access papers mention gma-MIR164j
(38 sentences)

Sequence

231139 reads, 906.0 reads per million, 176 experiments

aggucuugcUGGAGAAGCAGGGCACGUGCAacauuccugaugcuugcuccagcuuauuuugCACGUGCUCUCCUUUUCCAGCuugauu
.((((..((((((((((.(((((((((((((.((..(((..(....)..)))...)).))))))))))))).))))))))))..))))

Structure

a    uu          C             c  -uc   au c 
 gguc  gcUGGAGAAG AGGGCACGUGCAa au   cug  g u
 ||||  |||||||||| ||||||||||||| ||   |||  |  
 uuag  CGACCUUUUC UCUCGUGCACguu ua   gac  c u
-    uu          C             u  uuc   cu g 

Annotation confidence High

Genome context

chr19: 48278744-48278831 [+]

Mature gma-miR164j-5p

• Accession: MIMAT0024894
• Description: Glycine max gma-miR164j-5p mature miRNA
• Sequence: 10 - UGGAGAAGCAGGGCACGUGCA - 30
• Evidence: experimental ; Illumina [1]

Mature gma-miR164j-3p

• Accession: MIMAT0054376
• Description: Glycine max gma-miR164j-3p mature miRNA
• Sequence: 62 - CACGUGCUCUCCUUUUCCAGC - 82
• Evidence: experimental ; unknown

References

1. PubMed ID: 22559273
   Genome organization and characteristics of soybean microRNAs
   Turner M, Yu O, Subramanian S
   BMC Genomics (2012) 13:169