Stem-loop gma-MIR164d

Accession

MI0017828

Description

Glycine max gma-MIR164d precursor miRNA

Literature search

19 open access papers mention gma-MIR164d
(39 sentences)

Sequence

227641 reads, 820.0 reads per million, 175 experiments

guuaacuccuguUGGAGAAGCAGGGCACGUGCaacucacuucuaguuaaucugauuuugCACGUGCUCCCCUUCUCCAACacgauuuucc
......((.(((((((((((..((((((((((((.(((.............)))..))))))))))))..))))))))))).))......

Structure

guuaac  c           CA            -c   cuucu 
      uc uguUGGAGAAG  GGGCACGUGCaa  uca     a
      || |||||||||||  ||||||||||||  |||     g
      ag aCAACCUCUUC  CUCGUGCACguu  agu     u
ccuuuu  c           CC            uu   cuaau 

Annotation confidence High

Genome context

chr10: 38618021-38618110 [+]

Mature gma-miR164d-5p

• Accession: MIMAT0020977
• Description: Glycine max gma-miR164d-5p mature miRNA
• Sequence: 13 - UGGAGAAGCAGGGCACGUGC - 32
• Evidence: experimental ; 454 [1], Illumina [2]

Mature gma-miR164d-3p

• Accession: MIMAT0054174
• Description: Glycine max gma-miR164d-3p mature miRNA
• Sequence: 60 - CACGUGCUCCCCUUCUCCAAC - 80
• Evidence: experimental ; unknown

References

1. PubMed ID: 21504877
   MicroRNAs in the shoot apical meristem of soybean
   "Wong CE, Zhao YT, Wang XJ, Croft L, Wang ZH, Haerizadeh F, Mattick JS, Singh MB, Carroll BJ, Bhalla PL"
   "J Exp Bot (2011) 62:2495-2506


2. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153