Stem-loop gma-MIR1514a

Accession

MI0007226

Description

Glycine max gma-MIR1514a precursor miRNA

Literature search

6 open access papers mention gma-MIR1514a
(13 sentences)

Sequence

115083 reads, 254.0 reads per million, 178 experiments

cuuugcuauuUUCAUUUUUAAAAUAGGCAUUGgggucccuucuuguuccuccuuuuccuuuccuaucccaAUGCCUAUUUUAAAAUGAAAAcaacgaua
..(((...((((((((((.(((((((((((((((((............................)))))))))))))))))))))))))))...)))..

Structure

cu   cua          U                 cccuucuuguucc 
  uug   uuUUCAUUUU AAAAUAGGCAUUGgggu             u
  |||   |||||||||| |||||||||||||||||              
  agc   AAAAGUAAAA UUUUAUCCGUAacccua             c
au   aac          -                 uccuuuccuuuuc 

Annotation confidence High

Genome context

chr7: 43120760-43120858 [-]

Mature gma-miR1514a-5p

• Accession: MIMAT0007372
• Description: Glycine max gma-miR1514a-5p mature miRNA
• Sequence: 11 - UUCAUUUUUAAAAUAGGCAUUG - 32
• Evidence: experimental ; 454 [1], Illumina [2]

Mature gma-miR1514a-3p

• Accession: MIMAT0032031
• Description: Glycine max gma-miR1514a-3p mature miRNA
• Sequence: 71 - AUGCCUAUUUUAAAAUGAAAA - 91
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 18402695
   Novel and nodulation-regulated microRNAs in soybean roots
   Subramanian S, Fu Y, Sunkar R, Barbazuk WB, Zhu JK, Yu O
   BMC Genomics (2008) 9:160


2. PubMed ID: 24475082
   Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons
   Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ
   PLoS One (2014) 9:e86153