Stem-loop gma-MIR160f

Accession

MI0021682

Description

Glycine max gma-MIR160f precursor miRNA

Literature search

21 open access papers mention gma-MIR160f
(60 sentences)

Sequence

459671 reads, 783.0 reads per million, 178 experiments

uacauugugUGCCUGGCUCCCUGUAUGCCAUuuguagaccccaucacaauggugauggccuuaucaaaugGCGUAUGAGGAGUCAUGCAUGcugugu
.((((.((((((.(((((((.(((((((((((((..((..(((((((....)))))))..))..))))))))))))).))))))).)))))).))))

Structure

u    u      C       C             ua  cc       a 
 acau gugUGC UGGCUCC UGUAUGCCAUuug  ga  ccaucac a
 |||| |||||| ||||||| |||||||||||||  ||  |||||||  
 ugug cGUACG ACUGAGG GUAUGCGguaaac  uu  gguagug u
-    u      U       A             ua  cc       g 

Annotation confidence High

Genome context

chr10: 4750208-4750304 [-]

Mature gma-miR160f-5p

• Accession: MIMAT0024888
• Description: Glycine max gma-miR160f-5p mature miRNA
• Sequence: 10 - UGCCUGGCUCCCUGUAUGCCAU - 31
• Evidence: experimental ; Illumina [1]

Mature gma-miR160f-3p

• Accession: MIMAT0054370
• Description: Glycine max gma-miR160f-3p mature miRNA
• Sequence: 71 - GCGUAUGAGGAGUCAUGCAUG - 91
• Evidence: experimental ; unknown

References

1. PubMed ID: 22559273
   Genome organization and characteristics of soybean microRNAs
   Turner M, Yu O, Subramanian S
   BMC Genomics (2012) 13:169