Stem-loop sequence gma-MIR5678

AccessionMI0019278 (change log)
DescriptionGlycine max miR5678 stem-loop
Stem-loop 
   gc      c                        cacaug      a    u g           g           c   a  c   u             cuacacaugauaagcauaucac 
5'   aggaca guuccaugauaagaucuuugacug      guucua aauu c guugguaauaa agugaugacau gua uu uuu uuggaugagguga                      c
     |||||| ||||||||||||||||||||||||      |||||| |||| | ||||||||||| ||||||||||| ||| || ||| |||||||||||||                       
3'   uccugu caagguacuauucuagaaacugac      uaagau uuaa g caacuauuauu ucacuacugua cau aa aag aaccuacuccacu                      a
   ca      a                        ------      c    c a           a           a   a  a   u             cacgaccucucuuuaagacaua
Get sequence
Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Glycine_max_v2.0; GCA_000004515.3) Overlapping transcripts
chr14: 6867862-6868103 [+]
intergenic
Clustered miRNAs
< 10kb from gma-MIR5678
gma-MIR5678chr14: 6867862-6868103 [+]
gma-MIR5370chr14: 6870104-6870256 [+]
Database links

Mature sequence gma-miR5678

Accession MIMAT0022466
Sequence

11 -  

uuccaugauaagaucuuugac

 - 31

Get sequence
Evidence experimental; Illumina [1-2], RT-PCR [1]

References

1
PMID:21219599 "Identification of miRNAs and their target genes in developing soybean seeds by deep sequencing" Song QX, Liu YF, Hu XY, Zhang WK, Ma B, Chen SY, Zhang JS BMC Plant Biol. 11:5(2011).
2
PMID:24475082 "Systems and evolutionary characterization of microRNAs and their underlying regulatory networks in soybean cotyledons" Goettel W, Liu Z, Xia J, Zhang W, Zhao PX, An YQ PLoS One. 9:e86153(2014).