Stem-loop hco-mir-265

Accession

MI0020177

Description

Haemonchus contortus hco-mir-265 precursor miRNA

Literature search

1 open access papers mention hco-mir-265
(1 sentences)

Sequence

ggggaaagagcuauccagugccgcccaaaccucauuauugcauucaaaacugccuucaguaaagaaagauUGAGGGAGGAAGGGAAUAAUgggaaaccuu
.(((.....(((....)))....)))....(((((((((.(.(((....((.((((((((........))))))))))))).).))))))))).......

Structure

ggggaaagagcuauccagugccgcccaaac         g a   aaaa  g        aaa 
                              cucauuauu c uuc    cu ccuucagu   g
                              ||||||||| | |||    || ||||||||    
                              gggUAAUAA G AAG    GA GGGAGUua   a
-----------------------uuccaaa         G G   ----  -        gaa 

Annotation confidence Low

Genome context

Unknown

Mature hco-miR-265

• Accession: MIMAT0023508
• Description: Haemonchus contortus hco-miR-265 mature miRNA
• Sequence: 71 - UGAGGGAGGAAGGGAAUAAU - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22216965
   Diversity in parasitic nematode genomes: the microRNAs of Brugia pahangi and Haemonchus contortus are largely novel
   Winter AD, Weir W, Hunt M, Berriman M, Gilleard JS, Devaney E, Britton C
   BMC Genomics (2012) 13:4