Stem-loop bna-MIR164b

Accession

MI0020269

Description

Brassica napus bna-MIR164b precursor miRNA

Gene family

MIPF0000045; MIR164

Literature search

10 open access papers mention bna-MIR164b
(14 sentences)

Sequence

guuacacuugcUGGAGAAGCAGGGCACGUGCGaacaaaugagaucgaucgguauauguugaucauauuuucgcacguguucuacuacuccaacacgugugccucccccuc
..(((((.((.(((((.((.((((((((((((((..((((.(((((((........))))))).)))))))))))))))))).)).))))).)).)))))..........

Structure

--------gu     u  c     A  C              ca    a       cgg 
          uacac ug UGGAG AG AGGGCACGUGCGaa  aaug gaucgau   u
          ||||| || ||||| || ||||||||||||||  |||| |||||||    
          gugug ac accuc uc ucuugugcacgcuu  uuau cuaguug   a
cucccccucc     c  a     a  a              --    a       uau 

Annotation confidence Not enough data

Genome context

EM:AC189579: 62367-62476 [+]

Mature bna-miR164b

• Accession: MIMAT0023622
• Description: Brassica napus bna-miR164b mature miRNA
• Sequence: 12 - UGGAGAAGCAGGGCACGUGCG - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22138974
   Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes
   "Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ"
   "Plant Physiol (2012) 158:813-823