Stem-loop bna-MIR169n

Accession

MI0020276

Description

Brassica napus bna-MIR169n precursor miRNA

Gene family

MIPF0000037; MIR169_2

Literature search

11 open access papers mention bna-MIR169n
(44 sentences)

Sequence

agaauugcaugaaguggaguagaguauaaugCAGCCAAGGAUGACUUGCCGGagggucguucaucaugcauaauaauauuggugaugaacauaauucuggcaaguugcccuucggcuacauuuugcucucuucuacucaugcaaacucuc
(((.((((((((.((((((.((((((.((((.((((((((.(((((((((((((....(((((((((..(((....)))..)))))))))....))))))))))))).)))).)))).)))).)))))).))))))))))))))..))).

Structure

-   -a        a      u      u    C    -    A             gguc         gc   a 
 aga  uugcauga guggag agagua aaug AGCC AAGG UGACUUGCCGGag    guucaucau  aua u
 |||  |||||||| |||||| |||||| |||| |||| |||| |||||||||||||    |||||||||  |||  
 ucu  aacguacu caucuu ucucgu uuac ucgg uucc guugaacggucuu    caaguagug  uau a
c   ca        -      c      u    a    c    c             aaua         gu   a 

Annotation confidence Not enough data

Genome context

Unknown

Mature bna-miR169n

• Accession: MIMAT0023629
• Description: Brassica napus bna-miR169n mature miRNA
• Sequence: 32 - CAGCCAAGGAUGACUUGCCGG - 52
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22138974
   Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes
   "Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ"
   "Plant Physiol (2012) 158:813-823