Stem-loop bna-MIR172b

Accession

MI0020278

Description

Brassica napus bna-MIR172b precursor miRNA

Gene family

MIPF0000035; MIR172

Literature search

12 open access papers mention bna-MIR172b
(47 sentences)

Sequence

uaguugcagaugcagcaucauuaagauucacaagagaugugguuuucuuguuuucucgccucuugGGAAUCUUGAUGAUGCUGCAUcagcaacua
(((((((.(((((((((((((((((((((.((((((.((.((...........)).)).)))))).))))))))))))))))))))).)))))))

Structure

       a                     a      a  u  uuuu 
uaguugc gaugcagcaucauuaagauuc caagag ug gg    c
||||||| ||||||||||||||||||||| |||||| || ||    u
aucaacg cUACGUCGUAGUAGUUCUAAG guucuc gc cu    u
       a                     G      c  u  uuug 

Annotation confidence Not enough data

Genome context

EM:AC189648: 23979-24073 [-]

Mature bna-miR172b

• Accession: MIMAT0023631
• Description: Brassica napus bna-miR172b mature miRNA
• Sequence: 66 - GGAAUCUUGAUGAUGCUGCAU - 86
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22138974
   Small RNA profiling in two Brassica napus cultivars identifies microRNAs with oil production- and development-correlated expression and new small RNA classes
   "Zhao YT, Wang M, Fu SX, Yang WC, Qi CK, Wang XJ"
   "Plant Physiol (2012) 158:813-823