Stem-loop cgr-mir-122

Accession

MI0020383

Description

Cricetulus griseus cgr-mir-122 precursor miRNA

Gene family

MIPF0000095; mir-122

Sequence

8655 reads, 104 reads per million, 6 experiments

agcagagcugUGGAGUGUGACAAUGGUGUUUguguccaaacuaucaaacgccauuaucacacuaaauagcuacugcuagg
(((((((((((..(((((((.(((((((((((............))))))))))).)))))))..)))))).)))))...

Structure

---     -      GG       C           ugucc 
   agcag agcugU  AGUGUGA AAUGGUGUUUg     a
   ||||| ||||||  ||||||| |||||||||||      
   ucguc ucgaua  ucacacu uuaccgcaaac     a
gga     a      aa       a           uauca 

Annotation confidence Low

Genome context

JH000659.1: 638593-638672 [-]

Mature cgr-miR-122

• Accession: MIMAT0023739
• Description: Cricetulus griseus cgr-miR-122 mature miRNA
• Sequence: 11 - UGGAGUGUGACAAUGGUGUUU - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75