miRBase entry: cgr-mir-129

Stem-loop cgr-mir-129


Accession
MI0020392
Description
Cricetulus griseus cgr-mir-129 precursor miRNA
Gene family
MIPF0000073; mir-129


Sequence

5601 reads, 43 reads per million, 6 experiments
ccuuuggauCUUUUUGCGGUCUGGGCUUGCuguucucuagacaguagucaggaagcccuuaccccaaaaaguaucuacgg
.((.((((((((((((.(((..((((((.(((..((((....)).)).))).))))))..))).))))))).))))).))

Structure
c  u     -       C   CU      G   uu  -  a 
 cu uggau CUUUUUG GGU  GGGCUU Cug  cu cu g
 || ||||| ||||||| |||  |||||| |||  || ||  
 gg aucua gaaaaac cca  cccgaa gac  ga ga a
-  c     u       c   uu      g   -u  u  c 


Annotation confidence Low
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Genome context
JH000073.1: 1210829-1210908 [+]

Database links

Mature cgr-miR-129

Accession MIMAT0023751
Description Cricetulus griseus cgr-miR-129 mature miRNA
Sequence 10 - CUUUUUGCGGUCUGGGCUUGC - 30
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21392545
    Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
    "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
    "J Biotechnol (2011) 153:62-75