Stem-loop cgr-mir-152

Accession

MI0020413

Description

Cricetulus griseus cgr-mir-152 precursor miRNA

Gene family

MIPF0000056; mir-148

Sequence

12213 reads, 183 reads per million, 6 experiments

cccgggcccAGGUUCUGUGAUACACUCCGACUcgggcucuggagcagUCAGUGCAUGACAGAACUUGGgcccgguagg
.(((((((((((((((((.((.((((..((((...(((....))))))))))).)).)))))))))))))))))....

Structure

---c                 G  A    CC    cgg   c 
    ccgggcccAGGUUCUGU AU CACU  GACU   gcu u
    ||||||||||||||||| || ||||  ||||   |||  
    ggcccgGGUUCAAGACA UA GUGA  CUga   cga g
ggau                 G  C    --    ---   g 

Annotation confidence Low

Genome context

JH000166.1: 680189-680266 [+]

Mature cgr-miR-152-5p

• Accession: MIMAT0023784
• Description: Cricetulus griseus cgr-miR-152-5p mature miRNA
• Sequence: 10 - AGGUUCUGUGAUACACUCCGACU - 32
• Evidence: experimental ; Illumina [1]

Mature cgr-miR-152-3p

• Accession: MIMAT0023785
• Description: Cricetulus griseus cgr-miR-152-3p mature miRNA
• Sequence: 48 - UCAGUGCAUGACAGAACUUGG - 68
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75