Stem-loop cgr-mir-199b

Accession

MI0020449

Description

Cricetulus griseus cgr-mir-199b precursor miRNA

Gene family

MIPF0000040; mir-199

Sequence

4807 reads, 43 reads per million, 6 experiments

cuuccgaucuCCCAGUGUUUAGACUACCUGUUCaggacucccaaauuguacaguagccugcacauugguuagagaucgga
..((((((((((((((((.(((.((((.(((.(((..........))).))))))).))).)))))))...)))))))))

Structure

cu         ---       U   A    C   U   gacu 
  uccgaucuC   CCAGUGU UAG CUAC UGU Cag    c
  |||||||||   ||||||| ||| |||| ||| |||     
  aggcuagag   gguuaca guc gaug aca guu    c
--         auu       c   c    -   u   aaac 

Annotation confidence Low

Genome context

Unknown

Mature cgr-miR-199b

• Accession: MIMAT0023838
• Description: Cricetulus griseus cgr-miR-199b mature miRNA
• Sequence: 11 - CCCAGUGUUUAGACUACCUGUUC - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75