Stem-loop cgr-mir-344

Accession

MI0020503

Description

Cricetulus griseus cgr-mir-344 precursor miRNA

Gene family

MIPF0000267; mir-344

Sequence

3865 reads, 52 reads per million, 6 experiments

uuuuaucagucaggcuccuggcuagaauccagguaccaucugguaccUGAUCUAGCCAAAGCCUGACUGUaagcugugaa
.((((.((((((((((..((((((((...((((((((....)))))))).)))))))).)))))))))))))).......

Structure

------u    u          cc        auc        a 
       uuua cagucaggcu  uggcuaga   cagguacc u
       |||| ||||||||||  ||||||||   ||||||||  
       gaaU GUCAGUCCGA  ACCGAUCU   GUccaugg c
aaguguc    -          -A        --A        u 

Annotation confidence Low

Genome context

JH001601.1: 41086-41165 [+]

Mature cgr-miR-344

• Accession: MIMAT0023924
• Description: Cricetulus griseus cgr-miR-344 mature miRNA
• Sequence: 48 - UGAUCUAGCCAAAGCCUGACUGU - 70
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75