Stem-loop cgr-mir-384

Accession

MI0020519

Description

Cricetulus griseus cgr-mir-384 precursor miRNA

Gene family

MIPF0000289; mir-384

Sequence

2733 reads, 34 reads per million, 6 experiments

aaucaggaauUGUAAACAAUUCCUAGGCAAUGUguauaauguugguaagucAUUCCUAGAAAUUGUUCACAAUgccuguaac
...((((.(((((.(((((((.(((((.((((..................))))))))).))))))).))))).))))....

Structure

-aau    a     A       C     C    Uguauaau 
    cagg auUGU AACAAUU CUAGG AAUG        g
    |||| ||||| ||||||| ||||| ||||         
    gucc UAACA UUGUUAA GAUCC UUAc        u
caau    g     C       A     -    ugaauggu 

Annotation confidence Not enough data

Genome context

JH000560.1: 15553-15634 [-]

Mature cgr-miR-384-5p

• Accession: MIMAT0023948
• Description: Cricetulus griseus cgr-miR-384-5p mature miRNA
• Sequence: 11 - UGUAAACAAUUCCUAGGCAAUGU - 33
• Evidence: experimental ; Illumina [1]

Mature cgr-miR-384-3p

• Accession: MIMAT0023949
• Description: Cricetulus griseus cgr-miR-384-3p mature miRNA
• Sequence: 52 - AUUCCUAGAAAUUGUUCACAAU - 73
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75