Stem-loop cgr-mir-484

Accession

MI0020529

Description

Cricetulus griseus cgr-mir-484 precursor miRNA

Gene family

MIPF0000219; mir-484

Sequence

6058 reads, 74 reads per million, 6 experiments

ugcagccucgUCAGGCUCAGUCCCCUCCCGAUaaaccucuaaauaggguguuuccccggggguggccuccg
............((((.((.(((((....((...((((.......))))...))...)))))))))))...

Structure

ugcagccucgUC    U  G     UCCC  Uaa    cu 
            AGGC CA UCCCC    GA   accu  a
            |||| || |||||    ||   ||||  a
            uccg gu ggggg    cu   uggg  a
---------gcc    -  -     -ccc  uug    au 

Annotation confidence Not enough data

Genome context

JH000332.1: 1297236-1297306 [-]

Mature cgr-miR-484

• Accession: MIMAT0023966
• Description: Cricetulus griseus cgr-miR-484 mature miRNA
• Sequence: 11 - UCAGGCUCAGUCCCCUCCCGAU - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75