Stem-loop cgr-mir-499

Accession

MI0020533

Description

Cricetulus griseus cgr-mir-499 precursor miRNA

Gene family

MIPF0000173; mir-499

Sequence

2981 reads, 28 reads per million, 6 experiments

gggcagcugUUAAGACUUGCAGUGAUGUUUAgcuccucucuauguGAACAUCACAGCAAGUCUGUGCugcugccugc
(((((((.((..((((((((.((((((((((.............)))))))))).))))))))..)).)))))))..

Structure

--       u  UA        A          gcucc 
  gggcagc gU  AGACUUGC GUGAUGUUUA     u
  ||||||| ||  |||||||| ||||||||||     c
  uccgucg CG  UCUGAACG CACUACAAGu     u
cg       u  UG        A          guauc 

Annotation confidence Low

Genome context

JH000254.1: 1293015-1293091 [+]

Mature cgr-miR-499-5p

• Accession: MIMAT0023972
• Description: Cricetulus griseus cgr-miR-499-5p mature miRNA
• Sequence: 10 - UUAAGACUUGCAGUGAUGUUUA - 31
• Evidence: experimental ; Illumina [1]

Mature cgr-miR-499-3p

• Accession: MIMAT0023973
• Description: Cricetulus griseus cgr-miR-499-3p mature miRNA
• Sequence: 46 - GAACAUCACAGCAAGUCUGUGC - 67
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75