Stem-loop cgr-mir-504

Accession

MI0020537

Description

Cricetulus griseus cgr-mir-504 precursor miRNA

Gene family

MIPF0000437; mir-504

Sequence

8383 reads, 109 reads per million, 6 experiments

ugcuguugggAGACCCUGGUCUGCACCUCUAUCuguaaacauacugaagggagagcagggcaggguuucccauacaggaggcacaggcuaccaucucuug
(.((((((((((((((((.(((((..((((.((.(((....))).))..)))).))))).)))))))))))).)))).)(((....)))...........

Structure

--------------------- g    -            G     AC    -A  u   a 
                     u cugu ugggAGACCCUG UCUGC  CUCU  UC gua a
                     | |||| |||||||||||| |||||  ||||  || |||  
                     a gaca acccuuugggac ggacg  gagg  ag cau c
guucucuaccaucggacacgg g    u            g     -a    ga  u   a 

Annotation confidence Not enough data

Genome context

JH000262.1: 424466-424565 [-]

Mature cgr-miR-504

• Accession: MIMAT0023978
• Description: Cricetulus griseus cgr-miR-504 mature miRNA
• Sequence: 11 - AGACCCUGGUCUGCACCUCUAUC - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75