Stem-loop cgr-mir-874

Accession

MI0020558

Description

Cricetulus griseus cgr-mir-874 precursor miRNA

Gene family

MIPF0000401; mir-874

Sequence

6261 reads, 62 reads per million, 6 experiments

gguguuagcccugcggccccacgcaccaggguaagagagacuugcuucCUGCCCUGGCCCGAGGGACCGACuggcugggc
....((((((...(((.(((.((..((((((((.(((........))).))))))))..)).))).)))...))))))..

Structure

ggug      cug   c   a  ca        a   aga 
    uuagcc   cgg ccc cg  ccagggua gag   c
    ||||||   ||| ||| ||  |||||||| |||    
    ggucgg   GCC GGG GC  GGUCCCGU cuu   u
--cg      uCA   A   A  CC        C   cgu 

Annotation confidence Low

Genome context

JH002506.1: 75046-75125 [-]

Mature cgr-miR-874

• Accession: MIMAT0024007
• Description: Cricetulus griseus cgr-miR-874 mature miRNA
• Sequence: 49 - CUGCCCUGGCCCGAGGGACCGAC - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 21392545
   Next-generation sequencing of the Chinese hamster ovary microRNA transcriptome: Identification, annotation and profiling of microRNAs as targets for cellular engineering
   "Hackl M, Jakobi T, Blom J, Doppmeier D, Brinkrolf K, Szczepanowski R, Bernhart SH, Honer Zu Siederdissen C, Bort JA, Wieser M, Kunert R, Jeffs S, Hofacker IL, Goesmann A, Puhler A, Borth N, Grillari J"
   "J Biotechnol (2011) 153:62-75