Stem-loop sequence mes-MIR159a

AccessionMI0020959 (change log)
DescriptionManihot esculenta miR159a stem-loop
Gene family MIPF0000010; MIR159
Literature search

7 open access papers mention mes-MIR159a
(23 sentences)

              ga       ua        u  ----u      auu     g     c    g uc      c      u  uaaua     u 
5' uggagcuccuu  aguccaa  gaggaucu gc     ggguag   gagcu cugag uaug a  ccacag ccuauc ca     aagac u
   |||||||||||  |||||||  |||||||| ||     ||||||   ||||| ||||| |||| |  |||||| |||||| ||     |||||  
3' aucucgaggga  uuagguu  uuccuaga ug     uccauu   uucga gacuc auac u  gguguu ggauag gu     uucug u
              ag       ug        u  uauuc      -ac     g     u    g uc      c      -  ---uc     a 
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Confidence Annotation confidence: not enough data
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Genome context
Coordinates (Cassava4) Overlapping transcripts
scaffold03525: 998-1178 [-]
Database links

Mature sequence mes-miR159a-5p

Accession MIMAT0037459

45 - 


 - 65

Get sequence
Evidence experimental; Illumina [2]

Mature sequence mes-miR159a-3p

Accession MIMAT0024410

161 - 


 - 181

Get sequence
Evidence not experimental


"Overview of the potential of microRNAs and their target gene detection for cassava (Manihot esculenta) improvement" Amiteye S, Corral JM, Sharbel TF African J Biotech. 10:(2011).
PMID:26822616 "High-resolution identification and abundance profiling of cassava (Manihot esculenta Crantz) microRNAs" Khatabi B, Arikit S, Xia R, Winter S, Oumar D, Mongomake K, Meyers BC, Fondong VN BMC Genomics. 17:85(2016).