miRBase entry: gma-MIR156x

Stem-loop gma-MIR156x


Accession
MI0021677
Description
Glycine max gma-MIR156x precursor miRNA
Gene family
MIPF0000008; MIR156

Literature search
40 open access papers mention gma-MIR156x
(163 sentences)

Sequence

ggguaagagaggUGACAGAAGAGAGUGAGCACacaugguauuuucuuggaugauauaagauuucaugcuugaaacuaugcgugcucauucucuaucugucacccaucaucau
......((..((((((((((((((((((((((.((((((...(((..(.((((.........)))).)..))))))))).))))))))))))).)))))))))..)).....

Structure
ggguaa  ga         -             a      auu   uu g    uau 
      ga  ggUGACAGA AGAGAGUGAGCAC cauggu   uuc  g auga   a
      ||  ||||||||| ||||||||||||| ||||||   |||  | ||||   a
      cu  ccacugucu ucucuuacucgug guauca   aag  c uacu   g
-uacua  ac         a             c      ---   uu g    uua 


Annotation confidence Not enough data
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Genome context
chr14: 9223981-9224092 [+]

Database links

Mature gma-miR156x

Accession MIMAT0024883
Description Glycine max gma-miR156x mature miRNA
Sequence 13 - UGACAGAAGAGAGUGAGCAC - 32
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22559273
    Genome organization and characteristics of soybean microRNAs
    Turner M, Yu O, Subramanian S
    BMC Genomics (2012) 13:169