Stem-loop gma-MIR166n

Accession

MI0021690

Description

Glycine max gma-MIR166n precursor miRNA

Gene family

MIPF0000004; MIR166

Literature search

36 open access papers mention gma-MIR166n
(211 sentences)

Sequence

agguugagaggaauguugucuggcucgaggucauggaggaagaggagaguacugagaucagugaaaguuuccaauggaaauuuacccucuuaacacacacacagaaaaaaugauucUCGGACCAGGCUUCAUUCCCCccaccc
.(((.(.(.((((((..((((((.((((((((((.....((((((....(((((....))))).((((((((...))))))))..))))))..................)))).)))))).))))))..)))))).)).))).

Structure

a   u a a      uu      c      -    -------------ggagg      agaguacugagaucaguga        a 
 ggu g g ggaaug  gucugg ucgagg ucau                  aagagg                   aaguuucc  
 ||| | | ||||||  |||||| |||||| ||||                  ||||||                   |||||||| a
 cca c C CCUUAC  CGGACC GGCUcu agua                  uucucc                   uuuaaagg  
c   c - C      UU      A      u    aaaaagacacacacacaa      -----------------ca        u 

Annotation confidence Not enough data

Genome context

chr5: 38037266-38037408 [-]

Mature gma-miR166n

• Accession: MIMAT0024896
• Description: Glycine max gma-miR166n mature miRNA
• Sequence: 117 - UCGGACCAGGCUUCAUUCCCC - 137
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22559273
   Genome organization and characteristics of soybean microRNAs
   Turner M, Yu O, Subramanian S
   BMC Genomics (2012) 13:169