miRBase entry: gma-MIR166r

Stem-loop gma-MIR166r


Accession
MI0021694
Description
Glycine max gma-MIR166r precursor miRNA
Gene family
MIPF0000004; MIR166

Literature search
36 open access papers mention gma-MIR166r
(211 sentences)

Sequence

cacgucuugaggggaaugcagugugguccaaggagaugauauaucacuucaccauacucauaucuucacaaacucaucagauucagauguaauaauaauuuguaauauaugcauauuaugucuccUCGGACCAGGCUUCAUUCCCuucaauuaca
......((((((((((((.(((.((((((.((((((((((((.................)))))..........((((.......)))).....(((((.((((.....)))).)))))))))))).)))))).))).)))))))))))).....

Structure
cacguc            c   g      a       gauauaucacuucaccauacucauaucuucacaaacucaucagauucagauguaaua     u    a 
      uugaggggaaug agu uggucc aggagau                                                         auaau ugua u
      |||||||||||| ||| |||||| |||||||                                                         ||||| |||| a
      aacuuCCCUUAC UCG ACCAGG Uccucug                                                         uauua acgu u
-acauu            U   G      C       ---------------------------------------------------------     u    a 


Annotation confidence Not enough data
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Genome context
KQ474607.1: 1988-2142 [-]

Database links

Mature gma-miR166r

Accession MIMAT0024900
Description Glycine max gma-miR166r mature miRNA
Sequence 126 - UCGGACCAGGCUUCAUUCCC - 145
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22559273
    Genome organization and characteristics of soybean microRNAs
    Turner M, Yu O, Subramanian S
    BMC Genomics (2012) 13:169