Stem-loop gma-MIR390e

Accession

MI0021701

Description

Glycine max gma-MIR390e precursor miRNA

Gene family

MIPF0000101; MIR390

Literature search

19 open access papers mention gma-MIR390e
(74 sentences)

Sequence

gaagaauuuguaaAGCUCAGGAGGGAUAGCGCCauggaaggucuuucuacuaauuugcucuaucaugggugcuuugguuucgaucgaucuucucuagcgcuacccauccugaguuucaugguuucuu
.(((((.((((.(((((((((((((.((((((...((((((((..((.(((((..(((((......)))))..)))))...))..))))))))...))))))))).)))))))))).)))).)))))

Structure

g     u    a          -   A      Cau        uu  --u     uu     ua 
 aagaa uugu aAGCUCAGGA GGG UAGCGC   ggaagguc  uc   acuaa  ugcuc  u
 ||||| |||| |||||||||| ||| ||||||   ||||||||  ||   |||||  |||||   
 uucuu ggua uuugaguccu ccc aucgcg   ucuucuag  ag   ugguu  guggg  c
-     u    c          a   -      auc        cu  cuu     uc     ua 

Annotation confidence Not enough data

Genome context

chr18: 49001211-49001337 [+]

Mature gma-miR390e

• Accession: MIMAT0024907
• Description: Glycine max gma-miR390e mature miRNA
• Sequence: 14 - AGCUCAGGAGGGAUAGCGCC - 33
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22559273
   Genome organization and characteristics of soybean microRNAs
   Turner M, Yu O, Subramanian S
   BMC Genomics (2012) 13:169