Stem-loop gma-MIR395i

Accession

MI0021715

Description

Glycine max gma-MIR395i precursor miRNA

Gene family

MIPF0000016; MIR395

Literature search

15 open access papers mention gma-MIR395i
(70 sentences)

Sequence

cuguuggcugucuccugcaguuccucugaacgcuucaugugaggggcuagcaaguguauacguuauaauuuagccuucuucaAUGAAGUGUUUGGGGGAACUCuugggcucaacca
....(((.((..(((...((((((((((((((((((((.(((((((((((....((((.....))))..))))))..)))))))))))))))))))))))))...)))..)).)))

Structure

cugu   c  uc   ugc                    g     --      caag    u 
    ugg ug  ucc   aguuccucugaacgcuucau ugagg  ggcuag    ugua a
    ||| ||  |||   |||||||||||||||||||| |||||  ||||||    |||| c
    acc ac  ggg   UCAAGGGGGUUUGUGAAGUA acuuc  ccgauu    auau g
----   a  uc   uuC                    -     uu      --ua    u 

Annotation confidence Not enough data

Genome context

chr1: 4819957-4820072 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from gma-MIR395i

Mature gma-miR395i

• Accession: MIMAT0024921
• Description: Glycine max gma-miR395i mature miRNA
• Sequence: 83 - AUGAAGUGUUUGGGGGAACUC - 103
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22559273
   Genome organization and characteristics of soybean microRNAs
   Turner M, Yu O, Subramanian S
   BMC Genomics (2012) 13:169