Stem-loop sequence mmu-mir-6357

Accession

MI0021885 (change log)

Symbol

MGI:Mir6357

Description

Mus musculus miR-6357 stem-loop

Stem-loop

   -   -   aca     g gcuu u      -   c       gagag    -   a 
5'  gua cuu   aaggc c    g cggugu agg agggguu     ggac guu g
    ||| |||   ||||| |    | |||||| ||| |||||||     |||| |||  
3'  cgu gga   uuucg g    c gucacg uuc uucccgg     ccug cga g
   a   u   --c     g -acu -      a   u       --aua    a   u 

Deep sequencing

8 reads, 57.1 reads per million, 7 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCm38; GCA_000001635.2): chr18: 70516786-70516889 [+]
• Overlapping transcripts:

  antisense

  OTTMUST00000089337 ; Poli-002; intron 9

  OTTMUST00000067450 ; Poli-001; intron 9

  OTTMUST00000089338 ; Poli-003; intron 9

  OTTMUST00000089339 ; Poli-004; intron 9

  ENSMUST00000161542 ; Poli-002; intron 9

  ENSMUST00000121674 ; Poli-001; intron 9

  ENSMUST00000159389 ; Poli-003; intron 9

  ENSMUST00000160713 ; Poli-004; intron 9

  ENSMUST00000043286 ; Poli-201; intron 9

Database links

• MGI:Mir6357
• miRBase Tracker:MI0021885

Mature sequence mmu-miR-6357

• Accession: MIMAT0025100
• Sequence: 77 - uagcacugcucagggcuuucagg - 99
• Deep sequencing: 1 reads, 1 experiments
• Evidence: experimental; SOLiD [1]
• Predicted targets:
  • TargetScanVert:mmu-miR-6357
  • miRDB:mmu-miR-6357

References

1. PMID:22319597 "Complexity of murine cardiomyocyte miRNA biogenesis, sequence variant expression and function" Humphreys DT, Hynes CJ, Patel HR, Wei GH, Cannon L, Fatkin D, Suter CM, Clancy JL, Preiss T PLoS One. 7:e30933(2012).