Complexity of murine cardiomyocyte miRNA biogenesis, sequence variant expression and function |
|
|---|---|
| PubMed ID | 22319597 |
| Authors | Humphreys DT, Hynes CJ, Patel HR, Wei GH, Cannon L, Fatkin D, Suter CM, Clancy JL, Preiss T |
| Journal | PLoS One |
| Volume | 7 |
| Pages | e30933 |
| Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
|---|---|---|---|---|---|---|---|
| mmu-mir-195b | MI0021861 | 17 | 2 | 56675823 | 56675919 | + | - |
| mmu-mir-6335 | MI0021862 | 0 | 2 | 67611387 | 67611484 | + | - |
| mmu-mir-133c | MI0021863 | 0 | 2 | 29365227 | 29365306 | - | - |
| mmu-mir-6336 | MI0021864 | 0 | 2 | 42337451 | 42337580 | - | - |
| mmu-mir-6337 | MI0021865 | 0 | 2 | 65194640 | 65194744 | - | - |
| mmu-mir-6338 | MI0021866 | 0 | 11 | 72279582 | 72279690 | + | - |
| mmu-mir-6339 | MI0021867 | 0 | 2 | 129858212 | 129858328 | - | - |
| mmu-mir-6340 | MI0021868 | 0 | 2 | 173542823 | 173542941 | - | - |
| mmu-mir-6341 | MI0021869 | 0 | 1 | 12496210 | 12496330 | + | - |
| mmu-mir-6342 | MI0021870 | 0 | 1 | 29460569 | 29460693 | + | - |
| mmu-mir-6343 | MI0021871 | 0 | 1 | 76486197 | 76486280 | + | - |
| mmu-mir-6344 | MI0021872 | 0 | 1 | 82109637 | 82109740 | + | - |
| mmu-mir-6345 | MI0021873 | 0 | 1 | 93279880 | 93280007 | + | - |
| mmu-mir-6346 | MI0021874 | 0 | 1 | 118881950 | 118882030 | + | - |
| mmu-mir-6347 | MI0021875 | 0 | 1 | 167117694 | 167117794 | + | - |
| mmu-mir-6348 | MI0021876 | 0 | 1 | 168318212 | 168318331 | + | - |
| mmu-mir-6349 | MI0021877 | 0 | 1 | 39225977 | 39226073 | - | - |
| mmu-mir-6350 | MI0021878 | 0 | 1 | 47506180 | 47506284 | - | - |
| mmu-mir-6351 | MI0021879 | 0 | 1 | 73894636 | 73894734 | - | - |
| mmu-mir-6352 | MI0021880 | 0 | 1 | 77473290 | 77473405 | - | - |
| mmu-mir-6353 | MI0021881 | 0 | 1 | 84196570 | 84196682 | - | - |
| mmu-mir-6354 | MI0021882 | 0 | 1 | 168846543 | 168846658 | - | - |
| mmu-mir-6355 | MI0021883 | 1769 | 18 | 59712702 | 59712807 | + | - |
| mmu-mir-6356 | MI0021884 | 0 | 18 | 68872471 | 68872572 | + | - |
| mmu-mir-6357 | MI0021885 | 0 | 18 | 70649857 | 70649960 | + | - |
| mmu-mir-6358 | MI0021886 | 1 | 18 | 76303623 | 76303723 | + | - |
| mmu-mir-6359 | MI0021887 | 3 | 18 | 88990154 | 88990234 | + | - |
| mmu-mir-6360 | MI0021888 | 0 | 18 | 23907921 | 23908046 | - | - |
| mmu-mir-6361 | MI0021889 | 0 | 18 | 33013626 | 33013726 | - | - |
| mmu-mir-145b | MI0021890 | 147 | 18 | 69155270 | 69155344 | - | - |
| mmu-mir-6362 | MI0021891 | 0 | 16 | 22424076 | 22424182 | + | - |
| mmu-mir-6363 | MI0021892 | 0 | 16 | 50547495 | 50547608 | + | - |
| mmu-mir-6364 | MI0021893 | 0 | 16 | 5033653 | 5033738 | - | - |
| mmu-mir-6365 | MI0021894 | 0 | 16 | 13288944 | 13289044 | - | - |
| mmu-mir-6366 | MI0021895 | 0 | 16 | 17982953 | 17983034 | - | - |
| mmu-mir-6367 | MI0021896 | 0 | 16 | 91324331 | 91324432 | - | - |
| mmu-mir-6368 | MI0021897 | 0 | 13 | 28894764 | 28894856 | - | - |
| mmu-mir-6369 | MI0021898 | 98 | 13 | 58460858 | 58460963 | - | - |
| mmu-mir-6370 | MI0021899 | 0 | 6 | 19555341 | 19555460 | + | - |
| mmu-mir-6371 | MI0021900 | 0 | 6 | 50549378 | 50549488 | + | - |
| mmu-mir-6372 | MI0021901 | None | 11 | 26152240 | 26152348 | + | - |
| mmu-mir-6373 | MI0021902 | 0 | 6 | 102771345 | 102771446 | + | - |
| mmu-mir-6374 | MI0021903 | 0 | 6 | 83377978 | 83378084 | - | - |
| mmu-mir-6375 | MI0021904 | 0 | 6 | 85767122 | 85767216 | - | - |
| mmu-mir-6376 | MI0021905 | 0 | 6 | 88081110 | 88081240 | - | - |
| mmu-mir-21b | MI0021906 | 10 | 3 | 29690893 | 29691000 | + | - |
| mmu-mir-6377 | MI0021907 | 0 | 3 | 57524030 | 57524143 | + | - |
| mmu-let-7j | MI0021908 | 37 | 3 | 139734010 | 139734131 | + | - |
| mmu-mir-6378 | MI0021909 | 452 | 3 | 34976694 | 34976800 | - | - |
| mmu-mir-6379 | MI0021910 | 0 | 3 | 46855103 | 46855217 | - | - |
| mmu-mir-6380 | MI0021911 | 0 | 3 | 137489296 | 137489376 | - | - |
| mmu-mir-6381 | MI0021912 | 0 | 3 | 142329621 | 142329707 | - | - |
| mmu-mir-6382 | MI0021913 | 0 | X | 105353432 | 105353541 | + | - |
| mmu-mir-6383 | MI0021914 | 0 | X | 135083994 | 135084109 | + | - |
| mmu-mir-6384 | MI0021915 | 0 | X | 51466998 | 51467058 | - | - |
| mmu-mir-6385 | MI0021916 | 0 | 9 | 58128433 | 58128537 | + | - |
| mmu-mir-130c | MI0021917 | 0 | 9 | 53312105 | 53312186 | - | - |
| mmu-mir-6386 | MI0021918 | 1 | 9 | 92149311 | 92149414 | - | - |
| mmu-mir-6387 | MI0021919 | 0 | 12 | 15850995 | 15851102 | - | - |
| mmu-mir-6388 | MI0021920 | 0 | 12 | 115659340 | 115659414 | - | - |
| mmu-mir-5124b | MI0021921 | 157 | 14 | 11187212 | 11187296 | - | - |
| mmu-mir-6389 | MI0021922 | 2 | 7 | 57230809 | 57230910 | + | - |
| mmu-mir-378c | MI0021923 | 7927 | 14 | 47192287 | 47192385 | - | - |
| mmu-mir-6390 | MI0021924 | 1 | 14 | 105861076 | 105861204 | - | - |
| mmu-mir-6391 | MI0021925 | 0 | 14 | 118829781 | 118829884 | - | - |
| mmu-mir-6392 | MI0021926 | 12 | 15 | 84052471 | 84052578 | + | - |
| mmu-mir-6393 | MI0021927 | 0 | 15 | 87680051 | 87680144 | - | - |
| mmu-mir-6394 | MI0021928 | 0 | 7 | 95954874 | 95954972 | + | - |
| mmu-mir-1957b | MI0021929 | None | None | None | Low | ||
| mmu-mir-6395 | MI0021930 | 15 | 8 | 34633776 | 34633866 | - | - |
| mmu-mir-6396 | MI0021931 | 0 | 8 | 123349004 | 123349114 | - | - |
| mmu-mir-21c | MI0021932 | 8 | 8 | 129004629 | 129004706 | - | - |
| mmu-mir-6397 | MI0021933 | None | 4 | 107944554 | 107944646 | + | - |
| mmu-mir-6398 | MI0021934 | 0 | 4 | 123510213 | 123510314 | + | - |
| mmu-mir-6399 | MI0021935 | 16 | 4 | 137890520 | 137890603 | + | - |
| mmu-mir-6400 | MI0021936 | 0 | 4 | 15942900 | 15942991 | - | - |
| mmu-mir-6401 | MI0021937 | 0 | 7 | 139358934 | 139359042 | + | - |
| mmu-mir-6402 | MI0021938 | 7 | 4 | 91261521 | 91261600 | - | - |
| mmu-mir-6403 | MI0021939 | 0 | 4 | 134295034 | 134295162 | - | - |
| mmu-mir-6404 | MI0021940 | 0 | 7 | 143486852 | 143486945 | + | - |
| mmu-mir-6405 | MI0021941 | 0 | 19 | 44796845 | 44796968 | + | - |
| mmu-mir-496b | MI0021942 | 0 | 19 | 16292256 | 16292368 | - | - |
| mmu-mir-6406 | MI0021943 | 0 | 11 | 68111718 | 68111837 | + | - |
| mmu-mir-6407 | MI0021944 | 0 | 19 | 52999087 | 52999187 | - | - |
| mmu-mir-6408 | MI0021945 | 0 | 10 | 60758802 | 60758892 | + | - |
| mmu-mir-6409 | MI0021946 | 0 | 10 | 75844760 | 75844851 | + | - |
| mmu-mir-6410 | MI0021947 | 0 | 10 | 78270633 | 78270736 | + | - |
| mmu-mir-6411 | MI0021948 | 0 | 10 | 104123130 | 104123237 | + | - |
| mmu-mir-6412 | MI0021949 | 0 | 10 | 122484244 | 122484340 | + | - |
| mmu-mir-6413 | MI0021950 | 13 | 10 | 20173327 | 20173434 | - | - |
| mmu-mir-378d | MI0021951 | 16 | 10 | 126546151 | 126546260 | - | - |
| mmu-mir-6414 | MI0021952 | 0 | 5 | 42048685 | 42048766 | + | - |
| mmu-mir-6415 | MI0021953 | 0 | 5 | 92606416 | 92606515 | + | - |
| mmu-mir-6416 | MI0021954 | 0 | 7 | 63899731 | 63899847 | - | - |
| mmu-mir-6417 | MI0021955 | 0 | 5 | 52293244 | 52293359 | - | - |
| mmu-mir-6418 | MI0021956 | 11 | 5 | 137527742 | 137527856 | - | Medium |
| mmu-mir-6419 | MI0021957 | 0 | 2 | 17568325 | 17568437 | + | - |
| mmu-mir-6420 | MI0021958 | 0 | 17 | 64747801 | 64747902 | + | - |
| mmu-mir-873b | MI0021959 | 0 | 4 | 36668510 | 36668586 | + | - |
| mmu-mir-451b | MI0021960 | 4 | 11 | 77963996 | 77964067 | - | - |
| mmu-mir-30f | MI0021961 | 0 | 4 | 120629803 | 120629894 | + | Medium |
| mmu-mir-1a-1 | MI0000139 | 20001 | 2 | 180030841 | 180030917 | + | High |
| mmu-mir-30a | MI0000144 | 6204 | 1 | 23311350 | 23311420 | + | High |
| mmu-mir-30b | MI0000145 | 829 | 15 | 68209264 | 68209359 | - | High |
| mmu-mir-101a | MI0000148 | 2654 | 4 | 101204142 | 101204224 | - | High |
| mmu-mir-133a-1 | MI0000159 | 3209 | 18 | 10782909 | 10782976 | - | High |
| mmu-mir-140 | MI0000165 | 17279 | 8 | 108277876 | 108277945 | + | High |
| mmu-mir-145a | MI0000169 | 1227 | 18 | 61780896 | 61780965 | - | High |
| mmu-mir-151 | MI0000173 | 1221 | 15 | 73126664 | 73126731 | - | High |
| mmu-mir-181a-2 | MI0000223 | 7023 | 2 | 38742747 | 38742822 | + | High |
| mmu-mir-184 | MI0000226 | 1109 | 9 | 89684313 | 89684381 | - | - |
| mmu-mir-195a | MI0000237 | 1067 | 11 | 70125868 | 70125961 | + | High |
| mmu-mir-30e | MI0000259 | 4788 | 4 | 120629803 | 120629894 | - | High |
| mmu-mir-301a | MI0000401 | 1108 | 11 | 87003830 | 87003915 | + | High |
| mmu-let-7d | MI0000405 | 18752 | 13 | 48689488 | 48689590 | - | High |
| mmu-mir-30c-1 | MI0000547 | 1771 | 4 | 120626731 | 120626819 | - | High |
| mmu-mir-30c-2 | MI0000548 | 1771 | 1 | 23330782 | 23330865 | + | High |
| mmu-mir-30d | MI0000549 | 4620 | 15 | 68213057 | 68213138 | - | High |
| mmu-mir-208a | MI0000555 | 53 | 14 | 55186517 | 55186599 | - | High |
| mmu-mir-15a | MI0000564 | 1860 | 14 | 61869476 | 61869559 | - | High |
| mmu-mir-21a | MI0000569 | 34902 | 11 | 86474893 | 86474984 | - | High |
| mmu-mir-22 | MI0000570 | 10844 | 11 | 75354542 | 75354636 | + | High |
| mmu-mir-322 | MI0000590 | 4232 | X | 52143132 | 52143226 | - | High |
| mmu-mir-148b | MI0000617 | 537 | 15 | 103193552 | 103193648 | + | High |
| mmu-mir-1a-2 | MI0000652 | 19830 | 18 | 10785481 | 10785552 | - | High |
| mmu-mir-100 | MI0000692 | 870 | 9 | 41442721 | 41442800 | + | High |
| mmu-mir-210 | MI0000695 | 436 | 7 | 140801297 | 140801406 | - | High |
| mmu-mir-181a-1 | MI0000697 | 6982 | 1 | 137894193 | 137894279 | + | High |
| mmu-mir-222 | MI0000710 | 2137 | X | 19013132 | 19013210 | - | High |
| mmu-mir-133a-2 | MI0000820 | 3210 | 2 | 180040172 | 180040275 | + | High |
| mmu-mir-370 | MI0001165 | 299 | 12 | 109584692 | 109584770 | + | High |
| mmu-mir-448 | MI0001638 | 50 | X | 145941206 | 145941317 | + | High |
| mmu-mir-451a | MI0001730 | 9802 | 11 | 77963996 | 77964067 | + | Medium |
| mmu-mir-463 | MI0002398 | 1601 | X | 65842829 | 65842903 | - | High |
| mmu-mir-546 | MI0003517 | 41 | 10 | 126834309 | 126834429 | + | - |
| mmu-mir-541 | MI0003521 | 2088 | 12 | 109708843 | 109708932 | + | High |
| mmu-mir-449c | MI0004645 | 199 | 13 | 113172517 | 113172625 | + | High |
| mmu-mir-499 | MI0004676 | 273 | 2 | 155464800 | 155464878 | + | High |
| mmu-mir-711 | MI0004695 | 0 | 9 | 108798990 | 108799071 | + | - |
| mmu-mir-721 | MI0004708 | 1 | 5 | 136404570 | 136404657 | - | - |
| mmu-mir-743b | MI0005470 | 3974 | X | 65820862 | 65820938 | - | High |
| mmu-mir-881 | MI0005474 | 5169 | X | 65845550 | 65845627 | - | High |
| mmu-mir-883a | MI0005476 | 2603 | X | 65824364 | 65824439 | - | High |
| mmu-mir-883b | MI0005477 | 592 | X | 65833496 | 65833573 | - | High |
| mmu-mir-147 | MI0005482 | 230 | 2 | 122482723 | 122482801 | + | High |
| mmu-mir-873a | MI0005550 | 93 | 4 | 36668510 | 36668586 | - | High |
| mmu-mir-208b | MI0005552 | 76 | 14 | 55213157 | 55213233 | - | High |
| mmu-mir-1b | MI0006283 | 21 | 18 | 10785446 | 10785567 | + | High |
| mmu-mir-1195 | MI0006303 | 606 | chr17 | 70860503 | 70860600 | - | Low |
| mmu-mir-1927 | MI0009914 | 12 | 1 | 160123434 | 160123542 | - | High |
| mmu-mir-1933 | MI0009922 | 11 | 11 | 21294588 | 21294675 | - | High |
| mmu-mir-1943 | MI0009932 | 30 | 15 | 79259428 | 79259500 | - | High |
| mmu-mir-669o | MI0009945 | 254 | chr2 | 10514300 | 10514395 | + | High |
| mmu-mir-3067 | MI0014029 | 13 | 12 | 81212925 | 81213008 | + | - |
| mmu-mir-3074-1 | MI0014037 | 43 | 13 | 63449013 | 63449097 | - | Medium |
| mmu-mir-3102 | MI0014099 | 182 | 7 | 100531513 | 100531616 | - | Medium |
| mmu-mir-3074-2 | MI0014104 | 15 | 8 | 84935454 | 84935536 | - | Medium |
| mmu-mir-3470a | MI0014696 | 5921 | 6 | 83067292 | 83067368 | - | Low |
| mmu-mir-3470b | MI0014697 | 14199 | 16 | 43834215 | 43834340 | + | Low |
| mmu-mir-5123 | MI0018034 | 32 | 4 | 40850056 | 40850138 | - | - |