Stem-loop mmu-mir-30f

Accession

MI0021961

Symbol

MGI: Mir30f

Description

Mus musculus mmu-mir-30f precursor miRNA

Literature search

167 open access papers mention mmu-mir-30f
(771 sentences)

Sequence

2083 reads, 35.0 reads per million, 78 experiments

uggcagccugccgcuGUAAACAUCCGACUGAAAGCUCcucucaacaccuuacagcUUCCAGUCAAGGAUGUUUACAGuagcaaagacugccc
.((((((.(((.((((((((((((((((((.(((((................))))).)))))..))))))))))))).)))..).))))).

Structure

u     - -c   c             --     A     Ccucuca 
 ggcag c  ugc gcuGUAAACAUCC  GACUG AAGCU       a
 ||||| |  ||| |||||||||||||  ||||| |||||        
 ccguc g  acg uGACAUUUGUAGG  CUGAC UUcga       c
c     a aa   a             AA     C     cauucca 

Annotation confidence Medium

Genome context

4: 120629803-120629894 [+]

Clustered miRNAs

2 other miRNAs are < 10 kb from mmu-mir-30f

Mature mmu-miR-30f-5p

• Accession: MIMAT0025179
• Description: Mus musculus mmu-miR-30f-5p mature miRNA
• Sequence: 16 - GUAAACAUCCGACUGAAAGCUC - 37
• Evidence: experimental ; SOLiD [1]

Mature mmu-miR-30f-3p

• Accession: MIMAT0050744
• Description: Mus musculus mmu-miR-30f-3p mature miRNA
• Sequence: 56 - UUCCAGUCAAGGAUGUUUACAG - 77
• Evidence: experimental ; SOLiD [1]

References

1. PubMed ID: 22319597
   Complexity of murine cardiomyocyte miRNA biogenesis, sequence variant expression and function
   Humphreys DT, Hynes CJ, Patel HR, Wei GH, Cannon L, Fatkin D, Suter CM, Clancy JL, Preiss T
   PLoS One (2012) 7:e30933