Stem-loop mmu-mir-147

Accession

MI0005482

Symbol

MGI: Mir147

Description

Mus musculus mmu-mir-147 precursor miRNA mir-147

Gene
family

RF00693; mir-147

Literature search

19 open access papers mention mmu-mir-147
(63 sentences)

Sequence

16591 reads, 230 reads per million, 90 experiments

uaugaaucuagUGGAAACAUUUCUGCACAAACUAGauguugaugccaGUGUGCGGAAAUGCUUCUGCUAcauuuguagg
(((((((.((((((((.((((((((((((......((....)).....)))))))))))).)))))))).)))))))..

Structure

--       c        A            AACUAG  g 
  uaugaau uagUGGAA CAUUUCUGCACA      au u
  ||||||| |||||||| ||||||||||||      ||  
  auguuua AUCGUCUU GUAAAGGCGUGU      ua u
gg       c        C            -Gaccg  g 

Annotation confidence High

Genome context

chr2: 122640803-122640881 [+]

Mature mmu-miR-147-5p

• Accession: MIMAT0017269
• Description: Mus musculus mmu-miR-147-5p mature miRNA
• Sequence: 12 - UGGAAACAUUUCUGCACAAACUAG - 35
• Evidence: experimental ; Illumina [3]

Mature mmu-miR-147-3p

• Accession: MIMAT0004857
• Description: Mus musculus mmu-miR-147-3p mature miRNA
• Sequence: 48 - GUGUGCGGAAAUGCUUCUGCUA - 69
• Evidence: experimental ; cloned [1], Illumina [2-3]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


3. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009