Stem-loop mmu-mir-743b

Accession

MI0005470

Symbol

MGI: Mir743b

Description

Mus musculus mmu-mir-743b precursor miRNA mir-743

Gene
family

RF04270; mir-743

Literature search

7 open access papers mention mmu-mir-743b
(9 sentences)

Sequence

49697 reads, 2015 reads per million, 52 experiments

ugcagugcugUGUUCAGACUGGUGUCCAUCAugugaaauauuuguGAAAGACAUCAUGCUGAAUAGAguaaggccca
.((..((((.(((((((..(((((((..(((((.........)))))..)))))))..))))))).))))..))...

Structure

--u  ag    g       AC       CA     uga 
   gc  ugcu UGUUCAG  UGGUGUC  UCAug   a
   ||  |||| |||||||  |||||||  |||||   a
   cg  augA AUAAGUC  ACUACAG  AGugu   u
acc  ga    G       GU       AA     uua 

Annotation confidence High

Genome context

chrX: 66777256-66777332 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from mmu-mir-743b

Mature mmu-miR-743b-5p

• Accession: MIMAT0004839
• Description: Mus musculus mmu-miR-743b-5p mature miRNA
• Sequence: 11 - UGUUCAGACUGGUGUCCAUCA - 31
• Evidence: experimental ; cloned [1], Illumina [2-3]

Mature mmu-miR-743b-3p

• Accession: MIMAT0004840
• Description: Mus musculus mmu-miR-743b-3p mature miRNA
• Sequence: 46 - GAAAGACAUCAUGCUGAAUAGA - 67
• Evidence: experimental ; cloned [1], Illumina [2-3]

References

1. PubMed ID: 17604727
   A mammalian microRNA expression atlas based on small RNA library sequencing
   "Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M"
   "Cell (2007) 129:1401-1414


2. PubMed ID: 20215419
   MicroRNA transcriptome in the newborn mouse ovaries determined by massive parallel sequencing
   "Ahn HW, Morin RD, Zhao H, Harris RA, Coarfa C, Chen ZJ, Milosavljevic A, Marra MA, Rajkovic A"
   "Mol Hum Reprod (2010) 16:463-471


3. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009