Stem-loop mmu-mir-1943

Accession

MI0009932

Symbol

MGI: Mir1943

Description

Mus musculus mmu-mir-1943 precursor miRNA

Literature search

3 open access papers mention mmu-mir-1943
(3 sentences)

Sequence

3631 reads, 9 reads per million, 83 experiments

ggcugggAAGGGAGGAUCUGGGCACCUGGAccagcuccucccugCAGGUGCCAGCUCCUCCCUUCccagucac
((((((((((((((((.((((.((((((...(((.......))))))))))))).))))))))))))))))..

Structure

--                U    G      GAc   cu 
  ggcugggAAGGGAGGA CUGG CACCUG   cag  c
  |||||||||||||||| |||| ||||||   |||  c
  cugaccCUUCCCUCCU GACC GUGGAC   guc  u
ca                C    -      ---   cc 

Annotation confidence High

Genome context

chr15: 79375228-79375300 [-]

Mature mmu-miR-1943-5p

• Accession: MIMAT0009408
• Description: Mus musculus mmu-miR-1943-5p mature miRNA
• Sequence: 8 - AAGGGAGGAUCUGGGCACCUGGA - 30
• Evidence: experimental ; Illumina [1-2]

Mature mmu-miR-1943-3p

• Accession: MIMAT0017342
• Description: Mus musculus mmu-miR-1943-3p mature miRNA
• Sequence: 45 - CAGGUGCCAGCUCCUCCCUUC - 65
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009


2. PubMed ID: 18849523
   In-depth characterization of the microRNA transcriptome in a leukemia progression model
   "Kuchenbauer F, Morin RD, Argiropoulos B, Petriv OI, Griffith M, Heuser M, Yung E, Piper J, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Hansen CL, Marra MA, Humphries RK"
   "Genome Res (2008) 18:1787-1797