Stem-loop mmu-mir-669o

Accession

MI0009945

Symbol

MGI: Mir669o

Description

Mus musculus mmu-mir-669o precursor miRNA

Literature search

12 open access papers mention mmu-mir-669o
(16 sentences)

Sequence

18611 reads, 254 reads per million, 100 experiments

ugcaugugcauguguguaUAGUUGUGUGUGCAUGUUUAUGUguguauuugaauauACAUAACAUACACACACACGUAUaaacacaagcacacacac
((..(((((.(((((.((((..((((((((.(((((.((((((((......))))))))))))).))))))))..)))).))))).)))))..)).

Structure

-  ca     a     g    GU        C     U        au 
 ug  ugugc ugugu uaUA  UGUGUGUG AUGUU AUGUgugu  u
 ||  ||||| ||||| ||||  |||||||| ||||| ||||||||   
 ac  acacg acaca aUAU  ACACACAC UACAA UACAuaua  u
c  ac     a     a    GC        A     -        ag 

Annotation confidence High

Genome context

chr2: 10514300-10514395 [+]

Clustered miRNAs

19 other miRNAs are < 10 kb from mmu-mir-669o

Mature mmu-miR-669o-5p

• Accession: MIMAT0009421
• Description: Mus musculus mmu-miR-669o-5p mature miRNA
• Sequence: 19 - UAGUUGUGUGUGCAUGUUUAUGU - 41
• Evidence: experimental ; Illumina [1-2]

Mature mmu-miR-669o-3p

• Accession: MIMAT0017347
• Description: Mus musculus mmu-miR-669o-3p mature miRNA
• Sequence: 56 - ACAUAACAUACACACACACGUAU - 78
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 20413612
   Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
   "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
   "Genes Dev (2010) 24:992-1009


2. PubMed ID: 18849523
   In-depth characterization of the microRNA transcriptome in a leukemia progression model
   "Kuchenbauer F, Morin RD, Argiropoulos B, Petriv OI, Griffith M, Heuser M, Yung E, Piper J, Delaney A, Prabhu AL, Zhao Y, McDonald H, Zeng T, Hirst M, Hansen CL, Marra MA, Humphries RK"
   "Genome Res (2008) 18:1787-1797