Stem-loop sequence mmu-mir-6381

Accession

MI0021912 (change log)

Symbol

MGI:Mir6381

Description

Mus musculus miR-6381 stem-loop

Stem-loop

   u    -au     u  cau   u  a   --a  --ga     g  ca 
5'  cagg   gcugg ga   gag ga cag   ag    accaa ca  g
    ||||   ||||| ||   ||| || |||   ||    ||||| ||   
3'  guuc   cgacc cu   cuc cu guc   uc    ugguu gu  a
   u    gau     -  --u   -  -   cac  acgg     -  uu 

Deep sequencing

11 reads, 25 reads per million, 8 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCm38; GCA_000001635.2): chr3: 142623860-142623946 [-]
• Overlapping transcripts:

  antisense

  OTTMUST00000094412 ; Gbp2-001; 3'UTR (exon 2)

  OTTMUST00000094413 ; Gbp2-002; 3'UTR (exon 2)

  ENSMUST00000165774 ; Gbp2-001; 3'UTR (exon 2)

  ENSMUST00000169572 ; Gbp2-002; 3'UTR (exon 2)

Database links

• MGI:Mir6381
• miRBase Tracker:MI0021912

Mature sequence mmu-miR-6381

• Accession: MIMAT0025127
• Sequence: 2 - caggaugcuggugacaugagu - 22
• Deep sequencing: 5 reads, 4 experiments
• Evidence: experimental; SOLiD [1]
• Predicted targets:
  • TargetScanVert:mmu-miR-6381
  • miRDB:mmu-miR-6381

References

1. PMID:22319597 "Complexity of murine cardiomyocyte miRNA biogenesis, sequence variant expression and function" Humphreys DT, Hynes CJ, Patel HR, Wei GH, Cannon L, Fatkin D, Suter CM, Clancy JL, Preiss T PLoS One. 7:e30933(2012).