Stem-loop sequence mmu-mir-6412

Accession

MI0021949 (change log)

Symbol

MGI:Mir6412

Description

Mus musculus miR-6412 stem-loop

Literature search

1 open access papers mention mmu-mir-6412
(24 sentences)

Stem-loop

   -c    u    u  -u     ac  c       -ua    cagg    u  a 
5'   uagu agcu ga  guggu  ug acuccua   aucc    gucu gg g
     |||| |||| ||  |||||  || |||||||   ||||    |||| ||  
3'   auca ucga cu  uacca  gc ugaggau   uagg    cgga uc g
   ua    -    -  cc     aa  u       uag    ---a    -  u 

Deep sequencing

6045 reads, 55.1 reads per million, 98 experiments

Confidence

Annotation confidence: not enough data

Feedback: Do you believe this miRNA is real?

Genome context

• Coordinates (GRCm38; GCA_000001635.2): chr10: 122648339-122648435 [+]
• Overlapping transcripts:

  intergenic

Database links

• MGI:Mir6412
• miRBase Tracker:MI0021949

Mature sequence mmu-miR-6412

• Accession: MIMAT0025165
• Sequence: 74 - ucgaaaccauccucagcuacua - 95
• Deep sequencing: 6017 reads, 97 experiments
• Evidence: experimental; SOLiD [1]
• Predicted targets:
  • TargetScanVert:mmu-miR-6412
  • miRDB:mmu-miR-6412

References

1. PMID:22319597 "Complexity of murine cardiomyocyte miRNA biogenesis, sequence variant expression and function" Humphreys DT, Hynes CJ, Patel HR, Wei GH, Cannon L, Fatkin D, Suter CM, Clancy JL, Preiss T PLoS One. 7:e30933(2012).