miRBase entry: mmu-mir-378d

Stem-loop mmu-mir-378d


Accession
MI0021951
Symbol
MGI: Mir378d
Description
Mus musculus mmu-mir-378d precursor miRNA

Literature search
72 open access papers mention mmu-mir-378d
(737 sentences)

Sequence

1594 reads, 16 reads per million, 79 experiments
agaugcugggauagcACUGGCCUUGGAGUCAGAAGGUuugugauuugguggcagcucugccauccaauaucccugugauuuuuagggugucaguuucccuuuaagcaccg
.(.((((((((.(((....((((((((((((..(((.....((((((((((((....))))).)))).)))))).))).)))))))))....)))))))....)))).).

Structure
a a    ----    u   ACUG         -   GA   Uuugu   -    -     g 
 g ugcu    ggga agc    GCCUUGGAG UCA  AGG     gau uugg uggca c
 | ||||    |||| |||    ||||||||| |||  |||     ||| |||| |||||  
 c acga    cccu uug    ugggauuuu agu  ucc     cua aacc accgu u
g c    auuu    -   acug         u   -g   -----   u    u     c 


Annotation confidence Not enough data
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Genome context
chr10: 126710282-126710391 [-]

Database links

Mature mmu-miR-378d

Accession MIMAT0025167
Description Mus musculus mmu-miR-378d mature miRNA
Sequence 16 - ACUGGCCUUGGAGUCAGAAGGU - 37
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 22319597
    Complexity of murine cardiomyocyte miRNA biogenesis, sequence variant expression and function
    Humphreys DT, Hynes CJ, Patel HR, Wei GH, Cannon L, Fatkin D, Suter CM, Clancy JL, Preiss T
    PLoS One (2012) 7:e30933