miRBase entry: mmu-mir-873b

Stem-loop mmu-mir-873b


Accession
MI0021959
Symbol
MGI: Mir873b
Description
Mus musculus mmu-mir-873b precursor miRNA
Gene family
MIPF0000390; mir-873

Literature search
7 open access papers mention mmu-mir-873b
(39 sentences)

Sequence

5043 reads, 0 reads per million, 41 experiments
uuguggguguucccgggaacuugucagucuccugucuauuuucaauaggagacucACAAGUUCCUGCAAAUGCACAC
..(((.(((((..(((((((((((.((((((((((.........)))))))))).)))))))))))..))))).)))

Structure
uu   g     cc           c          cua 
  gug guguu  cgggaacuugu agucuccugu   u
  ||| |||||  ||||||||||| ||||||||||   u
  CAC CGUAA  GUCCUUGAACA ucagaggaua   u
--   A     AC           c          acu 


Annotation confidence Not enough data
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Genome context
chr4: 36668510-36668586 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from mmu-mir-873b
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-873b

Accession MIMAT0025177
Description Mus musculus mmu-miR-873b mature miRNA
Sequence 56 - ACAAGUUCCUGCAAAUGCACAC - 77
Evidence experimental
SOLiD [1]

References

  1. PubMed ID: 22319597
    Complexity of murine cardiomyocyte miRNA biogenesis, sequence variant expression and function
    Humphreys DT, Hynes CJ, Patel HR, Wei GH, Cannon L, Fatkin D, Suter CM, Clancy JL, Preiss T
    PLoS One (2012) 7:e30933