miRBase entry: ptc-MIR6436

Stem-loop ptc-MIR6436


Accession
MI0022011
Description
Populus trichocarpa ptc-MIR6436 precursor miRNA


Sequence

uagauaaaagauauuggaucauguuauugggucugguugcgcgaCCAGACUCAAUAGCAGGACCCAaugcugaugggucua
(((((...((.((((((.((.(((((((((((((((((....))))))))))))))))).)).)))))))).....)))))

Structure
     --aaa  a      a  a                 g 
uagau     ag uauugg uc uguuauugggucugguu c
|||||     || |||||| || |||||||||||||||||  
aucug     uc guaACC AG ACGAUAACUCAGACCag g
     gguag  -      C  G                 c 


Annotation confidence Not enough data
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Genome context
CM000346.2: 21038005-21038085 [-]

Database links

Mature ptc-miR6436

Accession MIMAT0025239
Description Populus trichocarpa ptc-miR6436 mature miRNA
Sequence 45 - CCAGACUCAAUAGCAGGACCCA - 66
Evidence experimental
miRNAseq [1]

References

  1. PubMed ID: 22442676
    Deep annotation of Populus trichocarpa microRNAs from diverse tissue sets
    Puzey JR, Karger A, Axtell M, Kramer EM
    PLoS One (2012) 7:e33034