Stem-loop sequence pde-MIR3701

Accession

MI0022116 (change log)

Description

Pinus densata miR3701 stem-loop

Gene family

MIPF0001553; MIR3701

Literature search

1 open access papers mention pde-MIR3701
(3 sentences)

Stem-loop

   c   -ac           u  a         u          caucu  ugu              -uuu     auau    c  c      aa g 
5'  gcc   agaugaagggu gg guuguucgg agaagaguuu     gu   aggauauggaggau    ccaaa    uugc au aaauua  a a
    |||   ||||||||||| || ||||||||| ||||||||||     ||   ||||||||||||||    |||||    |||| || ||||||  | c
3'  cgg   ucuacuuccca cc uaacaaguc ucuucuuaaa     cg   uccuauaucuccua    gguuu    aacg ua uuuggu  u u
   a   guc           c  g         c          -aucc  ucu              ucac     guuu    u  c      ga a 

Confidence

Annotation confidence: not enough data

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Database links

• miRBase Tracker:MI0022116

Mature sequence pde-miR3701

• Accession: MIMAT0025352
• Sequence: 165 - ugaacaaugcccacccuucauc - 186
• Evidence: experimental; Illumina [1]

References

1. PMID:22480283 "Transcriptome-wide identification and characterization of miRNAs from Pinus densata" Wan LC, Zhang H, Lu S, Zhang L, Qiu Z, Zhao Y, Zeng QY, Lin J BMC Genomics. 13:132(2012).