miRBase entry: ssc-mir-138

Stem-loop ssc-mir-138


Accession
MI0022131
Description
Sus scrofa ssc-mir-138 precursor miRNA
Gene family
MIPF0000075; mir-138

Literature search
5 open access papers mention ssc-mir-138
(8 sentences)

Sequence

gcgguggggcAGCUGGUGUUGUGAAUCAGGCcguugccaaucagagaacggcuacuucacaacaccagggucacaccccaccaca
(.(((((((...(((((((((((((...(((((((..(.....)..)))))))..))))))))))))).......))))))).).

Structure
- c       ----cAG             UCA       gc a 
 g ggugggg       CUGGUGUUGUGAA   GGCcguu  c a
 | |||||||       |||||||||||||   |||||||  | u
 c ccacccc       gaccacaacacuu   ucggcaa  g c
a a       acacugg             -ca       ga a 


Annotation confidence Not enough data
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Genome context
chr13: 30329402-30329486 [+]

Database links

Mature ssc-miR-138

Accession MIMAT0025363
Description Sus scrofa ssc-miR-138 mature miRNA
Sequence 11 - AGCUGGUGUUGUGAAUCAGGC - 31
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 21312241
    MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
    "Li G, Li Y, Li X, Ning X, Li M, Yang G"
    "J Cell Biochem (2011) 112:1318-1328