miRBase entry: gga-mir-3064

Stem-loop gga-mir-3064


Accession
MI0022380
Description
Gallus gallus gga-mir-3064 precursor miRNA
Gene family
MIPF0001238; mir-3064

Literature search
1 open access papers mention gga-mir-3064
(2 sentences)

Sequence

4 reads, 0 reads per million, 2 experiments
acuauugucuaacguuuaucuucgauuUGGCUGUUGUGGUGUGCAAAAcuuuguaccuugcuuuUUGCCACACUGCAACACUUUACAgauguggaagaugugaaauuugucaucaauuaugacu
................(((((((.(((((..(((((((((((((((((..............))))).)))))))))))).....)))))...)))))))........(((((.....))))).

Structure
--------acuauugucuaacguu       --g     ---GC            -     cuuugu 
                        uaucuuc   auuUG     UGUUGUGGUGUG CAAAA      a
                        |||||||   |||||     |||||||||||| |||||       
                        guagaag   uagAC     ACAACGUCACAC GUUuu      c
ucaguauuaacuacuguuuaaagu       gug     AUUUC            C     ucguuc 


Annotation confidence Not enough data
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Genome context
chr18: 6961443-6961566 [-]

Database links

Mature gga-miR-3064-5p

Accession MIMAT0025631
Description Gallus gallus gga-miR-3064-5p mature miRNA
Sequence 28 - UGGCUGUUGUGGUGUGCAAAA - 48
Evidence experimental
Illumina [1]

Mature gga-miR-3064-3p

Accession MIMAT0025632
Description Gallus gallus gga-miR-3064-3p mature miRNA
Sequence 65 - UUGCCACACUGCAACACUUUACA - 87
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 22418847
    Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
    "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
    "RNA Biol (2012) 9:212-227