miRBase entry: 22418847

Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation

PubMed ID 22418847
Authors "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
Journal "RNA Biol
Volume 9
Pages 212-227

There are 191 miRNAs associated with this paper:
Name Accession RPM Chromosome Start End Strand Confidence
gga-mir-6542 MI0022359 2 3 4603407 4603533 + -
gga-mir-6544 MI0022360 5 5 23979202 23979307 - High
gga-mir-6545 MI0022361 0 2 71346570 71346676 + -
gga-mir-6546 MI0022362 1 7 35870401 35870517 - High
gga-mir-6547 MI0022363 0 27 4231604 4231723 + -
gga-mir-124c MI0022364 5 2 114006641 114006741 - -
gga-mir-6548 MI0022365 1 14 7297814 7297920 - Medium
gga-mir-6549 MI0022366 0 8 24173723 24173835 + High
gga-mir-6550 MI0022367 1 10 19178610 19178709 + Medium
gga-mir-3607 MI0022368 None None None Low
gga-mir-6551 MI0022369 0 18 9942901 9943008 - High
gga-mir-6552 MI0022370 8 5 44705051 44705154 + High
gga-mir-6553 MI0022371 1 1 76850134 76850234 - Medium
gga-mir-6554 MI0022372 0 2 6771781 6771886 + -
gga-mir-222b MI0022373 100 4 2125543 2125653 + -
gga-mir-6555 MI0022374 10 1 166934385 166934484 - High
gga-mir-6556 MI0022375 0 9 23329384 23329489 - -
gga-mir-6558 MI0022376 None 9 14855983 14856104 + -
gga-mir-6559 MI0022377 2 1 133166352 133166460 - High
gga-mir-6560 MI0022378 0 6 33177991 33178100 - -
gga-mir-6561 MI0022379 1 8 10974855 10974959 + -
gga-mir-3064 MI0022380 0 chr18 6961443 6961566 - Low
gga-mir-6564 MI0022381 0 20 11286817 11286914 - -
gga-mir-6565 MI0022382 1 Z 56195935 56196035 + -
gga-mir-6566 MI0022383 0 16 1567350 1567453 - Medium
gga-mir-6567 MI0022384 0 20 8784231 8784337 - -
gga-mir-3594 MI0022385 1 4 90406839 90406945 + -
gga-mir-6568 MI0022386 0 3 54888171 54888268 + High
gga-mir-6569 MI0022387 5 chr13 4700575 4700678 + Low
gga-mir-6570 MI0022388 0 1 184882378 184882477 + High
gga-mir-6571 MI0022389 0 2 64099143 64099248 + -
gga-mir-6572 MI0022390 0 2 144569797 144569904 - Medium
gga-mir-6573 MI0022391 1 27 1154137 1154255 + -
gga-mir-6574 MI0022392 0 9 7290556 7290662 - -
gga-mir-6575 MI0022393 0 10 2718640 2718747 - -
gga-mir-6576 MI0022394 0 22 107521 107626 + -
gga-mir-6577 MI0022395 0 6 17989991 17990098 + -
gga-mir-6578 MI0022396 0 chr3 105429051 105429152 + Low
gga-mir-6579-1 MI0022397 None chr5 500362 500475 - -
gga-mir-6579-2 MI0022398 0 5 724698 724811 - -
gga-mir-6580 MI0022399 None 3 27001101 27001205 - -
gga-mir-6581 MI0022400 0 1 48407145 48407246 - -
gga-mir-6582 MI0022401 6 3 56961607 56961711 + Low
gga-mir-6583 MI0022402 0 3 840427 840536 + -
gga-mir-365b MI0022403 1 14 779907 780016 - -
gga-mir-6584 MI0022404 1 chr2 93858571 93858680 - Low
gga-mir-6585 MI0022405 1 19 5540626 5540735 + -
gga-mir-6586 MI0022406 1 4 68540627 68540736 - -
gga-mir-6587 MI0022407 0 5 25717663 25717771 - -
gga-mir-6588 MI0022408 0 13 17069176 17069285 - -
gga-mir-6589 MI0022409 0 11 10722673 10722782 - -
gga-mir-6590 MI0022410 1 5 45925058 45925161 - High
gga-mir-6591 MI0022411 0 4 34325120 34325229 + -
gga-mir-6592 MI0022412 0 19 3694080 3694189 + Medium
gga-mir-6593 MI0022413 1 chr28 1402699 1402815 - Medium
gga-mir-6594 MI0022414 0 4 553063 553172 + High
gga-mir-6595 MI0022415 0 11 12934924 12935033 - -
gga-mir-6596 MI0022416 0 10 10794521 10794614 - -
gga-mir-6597 MI0022417 0 20 11238008 11238117 - -
gga-mir-6598 MI0022418 0 5 37374309 37374417 - -
gga-mir-6600 MI0022419 0 2 5821725 5821834 - -
gga-mir-6601 MI0022420 1 2 23787438 23787547 + -
gga-mir-6602 MI0022421 0 chr26 2287351 2287460 - Low
gga-mir-6603 MI0022422 2 chr5 23106648 23106757 + Low
gga-mir-6604 MI0022423 1 6 23150753 23150862 + Medium
gga-mir-6605 MI0022424 0 3 83942171 83942280 - -
gga-mir-6606 MI0022425 0 1 76384092 76384201 - -
gga-mir-6607 MI0022426 0 26 729010 729119 - -
gga-mir-6608-1 MI0022427 2236 chr1 65891957 65892066 + Low
gga-mir-6609 MI0022428 0 1 79989296 79989405 + -
gga-mir-6610 MI0022429 0 2 4901426 4901535 + -
gga-mir-6611 MI0022430 0 9 12004141 12004250 - -
gga-mir-6612 MI0022431 None 24 4839870 4839979 - -
gga-mir-6613 MI0022432 0 Z 11161743 11161852 - -
gga-mir-6614 MI0022433 0 chr4 13813913 13814022 + Low
gga-mir-6615 MI0022434 11 28 2189525 2189635 - Medium
gga-mir-6616 MI0022435 0 1 92532047 92532156 + -
gga-mir-6617 MI0022436 0 9 15887595 15887704 - -
gga-mir-6618 MI0022437 0 26 1807824 1807933 - -
gga-mir-6619 MI0022438 None 34 1674127 1674236 + -
gga-mir-6620 MI0022439 None 25 2775291 2775400 + -
gga-mir-4732 MI0022440 0 3 30034349 30034458 - -
gga-mir-6621 MI0022441 0 1 3253111 3253220 + High
gga-mir-6623 MI0022442 0 8 24303958 24304067 - -
gga-mir-6624 MI0022443 0 7 15879996 15880103 + -
gga-mir-6625 MI0022444 1 10 2410117 2410226 - -
gga-mir-6626 MI0022445 0 21 4624063 4624172 - -
gga-mir-6627 MI0022446 0 4 89298569 89298678 - -
gga-mir-6628 MI0022447 0 2 12061453 12061562 - -
gga-mir-6629 MI0022448 0 1 1455180 1455289 + -
gga-mir-6630 MI0022449 0 2 128507024 128507133 - -
gga-mir-6631 MI0022450 2 3 12220393 12220502 + -
gga-mir-6632 MI0022451 0 4 44402311 44402420 + -
gga-mir-6633 MI0022452 0 3 79900916 79901025 + -
gga-mir-6634 MI0022453 29 3 89210497 89210606 - -
gga-mir-6635-1 MI0022454 0 15 6935759 6935868 + -
gga-mir-6635-2 MI0022455 0 15 6935759 6935868 + -
gga-mir-6637-1 MI0022456 0 23 5573980 5574089 + -
gga-mir-6637-2 MI0022457 0 23 5581431 5581540 + -
gga-mir-6639 MI0022458 0 19 9159301 9159410 - -
gga-mir-6640 MI0022459 0 3 21886594 21886703 + -
gga-mir-6641 MI0022460 0 1 179062206 179062309 + -
gga-mir-6642 MI0022461 0 5 13280224 13280324 + -
gga-mir-6643 MI0022462 0 14 13156430 13156539 - High
gga-mir-6645 MI0022463 3 chr5 39173710 39173819 + High
gga-mir-6646-1 MI0022464 0 25 2336275 2336384 + -
gga-mir-6647 MI0022465 0 8 19491176 19491285 - -
gga-mir-6644-2 MI0022466 0 27 395052 395161 + -
gga-mir-6648-1 MI0022467 4 15 6665865 6665925 - Medium
gga-mir-6649 MI0022468 3 Z 9130588 9130726 - High
gga-mir-6650 MI0022469 0 15 7690875 7690984 - Medium
gga-mir-6651 MI0022470 3 Z 49359196 49359305 + -
gga-mir-6652 MI0022471 0 13 8535850 8535959 + -
gga-mir-3524b MI0022472 7 chr2 95943670 95943779 - -
gga-mir-6653 MI0022473 0 8 28437373 28437482 - -
gga-mir-6654 MI0022474 0 26 2888955 2889064 - -
gga-mir-6655 MI0022475 0 3 96428108 96428217 + -
gga-mir-6656 MI0022476 0 1 175764069 175764178 - -
gga-mir-6657 MI0022477 0 6 20861150 20861259 + -
gga-mir-6658 MI0022478 1 4 1152075 1152184 - -
gga-mir-6659 MI0022479 0 1 2247775 2247884 - -
gga-mir-6660 MI0022480 2 10 1605052 1605161 - -
gga-mir-6661 MI0022481 0 4 82156066 82156174 + -
gga-mir-6662 MI0022482 0 25 852314 852423 + -
gga-mir-6663 MI0022483 0 27 3950977 3951086 - -
gga-mir-6664 MI0022484 3 20 947860 947969 - -
gga-mir-6665 MI0022485 0 8 5216920 5217029 - -
gga-mir-6666 MI0022486 0 28 5154919 5155028 + -
gga-mir-6667 MI0022487 0 11 18411284 18411393 + -
gga-mir-6668 MI0022488 2 4 33602967 33603076 + -
gga-mir-6669 MI0022489 0 Z 28126937 28127044 - High
gga-mir-6670 MI0022490 0 3 79286139 79286248 + -
gga-mir-6671 MI0022491 0 24 5095982 5096091 + -
gga-mir-6672 MI0022492 1 1 112728295 112728404 + -
gga-mir-6673 MI0022493 0 15 8865911 8866020 - -
gga-mir-6674 MI0022494 0 20 2499731 2499840 - -
gga-mir-6675 MI0022495 1 24 3397125 3397233 + Medium
gga-mir-6676 MI0022496 0 1 1445060 1445169 - -
gga-mir-6677 MI0022497 0 20 13418285 13418393 + High
gga-mir-6678 MI0022498 4 3 102528690 102528799 + -
gga-mir-6679 MI0022499 None 4 15514589 15514698 - -
gga-mir-6680 MI0022500 2 21 2631871 2631978 + -
gga-mir-1684b MI0022501 1 4 88672199 88672308 - High
gga-mir-6681 MI0022502 1 20 8757852 8757961 - Low
gga-mir-6682 MI0022503 2 4 20894734 20894841 + -
gga-mir-6683 MI0022504 1 5 29655595 29655704 + -
gga-mir-6684 MI0022505 0 12 11266925 11267034 + -
gga-mir-6685 MI0022506 1 5 24550081 24550180 + Low
gga-mir-6686 MI0022507 0 14 770692 770801 + -
gga-mir-6687 MI0022508 1 3 81192775 81192884 - -
gga-mir-6688 MI0022509 0 4 21264525 21264633 + -
gga-mir-6689 MI0022510 1 4 3177965 3178074 - High
gga-mir-6690 MI0022511 0 3 107174467 107174576 - -
gga-mir-6691-1 MI0022512 1 7 5856988 5857094 + -
gga-mir-6692 MI0022513 0 10 1227714 1227823 - -
gga-mir-6693 MI0022514 0 28 4733907 4734016 + -
gga-mir-6694 MI0022515 0 6 33393627 33393735 - -
gga-mir-6695 MI0022516 4 27 772679 772788 + High
gga-mir-6696 MI0022517 0 17 5366411 5366511 + Medium
gga-mir-6697 MI0022518 0 3 57711596 57711705 + -
gga-mir-6698 MI0022519 0 2 67530869 67530978 + High
gga-mir-6516 MI0022520 3 18 4757305 4757414 - Medium
gga-mir-6699 MI0022521 1 3 67140726 67140835 - Low
gga-mir-6700 MI0022522 86 1 59393049 59393157 - -
gga-mir-6701 MI0022523 0 2 96858906 96859015 - -
gga-mir-6702 MI0022524 27 3 107181689 107181798 + Medium
gga-mir-6703 MI0022525 0 10 2543202 2543310 - -
gga-mir-6704 MI0022526 0 4 8598231 8598340 + -
gga-mir-6705 MI0022527 0 4 84588250 84588359 - -
gga-mir-6706 MI0022528 0 5 23198974 23199083 - Medium
gga-mir-6707 MI0022529 2 2 106481110 106481219 + -
gga-mir-6708 MI0022530 0 1 709518 709627 + -
gga-mir-6709 MI0022531 1 11 555661 555770 - -
gga-mir-6710 MI0022532 0 2 778661 778770 - -
gga-mir-6711 MI0022533 0 3 10245019 10245128 - -
gga-mir-6712 MI0022534 0 17 10123652 10123761 - -
gga-mir-6713 MI0022535 0 2 2512084 2512193 - -
gga-mir-6714 MI0022536 0 14 12394757 12394866 - -
gga-mir-6622 MI0022537 0 8 21863851 21863960 - -
gga-mir-6644-1 MI0022538 0 27 395052 395159 + -
gga-mir-6543 MI0022539 5 1 133721599 133721706 + Medium
gga-mir-6557 MI0022540 0 2 60795847 60795952 + High
gga-mir-458b MI0022541 2 13 7854991 7855092 + High
gga-mir-6562 MI0022542 120 chr2 82060204 82060313 - Low
gga-mir-6563 MI0022543 0 3 16072466 16072575 + Medium
gga-mir-6599 MI0022544 0 18 5669639 5669735 - High
gga-mir-6608-2 MI0023553 2236 chr1 65895167 65895276 + Low
gga-mir-6646-2 MI0023554 0 25 2336275 2336384 + -
gga-mir-6648-2 MI0023555 4 15 6665850 6665948 + Medium
gga-mir-6691-2 MI0023556 1 7 5856988 5857094 + -
gga-mir-6635-3 MI0031112 0 15 6935759 6935868 + -



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