Stem-loop gga-mir-6604

Accession

MI0022423

Description

Gallus gallus gga-mir-6604 precursor miRNA

Sequence

27 reads, 1 reads per million, 5 experiments

gggcacccuguccuggaggcUGGCACGGUGCUAGGGAUUUCUGUgccagcaucuugcacugacucccuuguccugugccccaggaguggaagaggagguggcagaugugc
.(.((((((.((((((.....(((((((.((.(((((..((.((((.((...)).)))).)).))))).)).)))))))))))))..)).......)))).)........

Structure

-------g g    -------  -g      aggcU       U  U     UU  U    c  c 
        g cacc       cu  uccugg     GGCACGG GC AGGGA  UC GUgc ag  
        | ||||       ||  ||||||     ||||||| || |||||  || |||| || a
        c gugg       gg  aggacc     ccguguc ug ucccu  ag cacg uc  
cguguaga g    aggagaa  ug      -----       c  u     -c  u    u  u 

Annotation confidence Not enough data

Genome context

chr6: 22353378-22353487 [+]

Mature gga-miR-6604-5p

• Accession: MIMAT0025698
• Description: Gallus gallus gga-miR-6604-5p mature miRNA
• Sequence: 21 - UGGCACGGUGCUAGGGAUUUCUGU - 44
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227