Stem-loop gga-mir-6695

Accession

MI0022516

Description

Gallus gallus gga-mir-6695 precursor miRNA

Sequence

277 reads, 3.0 reads per million, 32 experiments

uaaugagauuuugaaagaggUUGGGAAGGAACAAAGCAUGACUUggcacauaaccaCAUGGCUUCUGCUCCUUCCCAGccacacgggagucugcguuuguccacgccauc
.....(((((((......((((((((((((.(((((((((...(((.......)))))).)))).)).)))))))))))).....)))))))((((......))))....

Structure

-------------uaaug       gaaaga            A  -    -   ACU   ca 
                  agauuuu      ggUUGGGAAGGA CA AAGC AUG   Ugg  c
                  |||||||      |||||||||||| || |||| |||   |||  a
                  ucugagg      ccGACCCUUCCU GU UUCG UAC   acc  u
cuaccgcaccuguuugcg       -gcaca            C  C    G   ---   aa 

Annotation confidence High

Genome context

27: 772679-772788 [+]

Mature gga-miR-6695-5p

• Accession: MIMAT0025801
• Description: Gallus gallus gga-miR-6695-5p mature miRNA
• Sequence: 21 - UUGGGAAGGAACAAAGCAUGACUU - 44
• Evidence: experimental ; Illumina [1]

Mature gga-miR-6695-3p

• Accession: MIMAT0051303
• Description: Gallus gallus gga-miR-6695-3p mature miRNA
• Sequence: 57 - CAUGGCUUCUGCUCCUUCCCAG - 78
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 22418847
   Drastic expression change of transposon-derived piRNA-like RNAs and microRNAs in early stages of chicken embryos implies a role in gastrulation
   "Shao P, Liao JY, Guan DG, Yang JH, Zheng LL, Jing Q, Zhou H, Qu LH"
   "RNA Biol (2012) 9:212-227